Home
Mutant Lines
54-0298-1

54-0298-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

5 prime edge [+] show sequence

Chromosome: 4; Position: 18441496 [Map]; Strand: w
- AT4G39756.1 - [+] show detail - Galactose oxidase/kelch repeat superfamily protein
  Distance: -260; Region: promoter

GGGATAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
CCCATCCTAC TTTCATCCCG TATACGGACT TTGGTTATTT TCCCAAACGG 
GGACGATTTT GATAATTTAA CTAAATCAAG GGGTTAGTTT TTAAAGATTA 
GAAAAAGCAT GTTTTTATAT ATATATAGTT CATTGCTTAG ACCTAATTGT 
GTNTGTTTAA GTATGAAGAA GTCCAAAGTA GAACCACCGC AAACAAAATC 
TCCATCTCGA GGTTGGTTTG CTTATTCATG TTTAACCCTA ATCTCTTCTA 
AGAAAACCCT AATCTCTGCC GCAAGCTATG GATTCCGAAG CCGAACCACC 
GCAGGAAAAG AAGAAACCAA ATTCATGTCC GTCGTTTTTG TCCCTTCCTG 
AAGAAATNCT TGTAAACTGT TTAGCCCGCA TACCGAAATC GTACTACCCG 
AAACTCTCCT TAGTCTGCAA GAGCTTNTGC TCTCTCATCT TATCCATGGA 
ACTTTACGTG GAGCGATTGT ACCTTGGTAC ACATGAAGAC GTCCTTCACG 
TCTGCTTACA GTTGCCCGAN CGTCGTCTTC CTTCATGGTT TAGTCTCTGG 
ACTAAACCGG ATCAAACCCT AACCAACGAC ATTGGGAAGA AGAAAAAGTC 
CACTANAAAT ACTTTGTTGG TACCAATACC TTCTNCTTAT TCTCCTCNTG 
TACCAATGTT CATCGGTGAG ATTGGTTNAN AATTATACGC TATNAGCANA 
CATAATACTN CATACTNCGT CATGT

3 prime edge [+] show sequence
1. Chromosome: 4; Position: 18441446 [Map]; Strand: w
  - AT4G39756.1 - [+] show detail - Galactose oxidase/kelch repeat superfamily protein
    Distance: -310; Region: promoter
Flanking Genome Sequence: 54-0298-1 - 3-prime edge
```
TATACGGTTT CTTAGATTTA ACACCAAGCA CACACACACA AACACACAAA 
TGTAGCATAG TTTCATGTCA AACTATTTAA TAAAGGTTAA GCAAAGCT
```

AT4G39756.1

Model type: Protein coding
Short Description: Galactose oxidase/kelch repeat superfamily protein
Computational Description: Galactose oxidase/kelch repeat superfamily protein; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), Galactose oxidase/kelch, beta-propeller (InterPro:IPR011043), Kelch repeat type 1 (InterPro:IPR006652), Kelch related (InterPro:IPR013089), Kelch-type beta propeller (InterPro:IPR015915); BEST Arabidopsis thaliana protein match is: Galactose oxidase/kelch repeat superfamily protein (TAIR:AT5G28160.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link: InterPro Scan - TAIR