Home
Mutant Lines
54-0303-1

54-0303-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

5 prime edge [+] show sequence

Chromosome: 2; Position: 161778 [Map]; Strand: w
- AT2G01330.1 - [+] show detail - nucleotide binding
  Distance: -920; Region: promoter
- AT2G01330.2 - [+] show detail - nucleotide binding
  Distance: -877; Region: promoter

CTAGTTAGTC ACACATTGAT ATAATTGGTT TCTTAATTCA TCATAGAAAG 
TAATCTGTAC GTATATGATT GGTTCATTCG CAATCCATTT TATTTGGTTA 
TCGGATGGGT CATCAATGGA GATTAACAAG GTTTTGAAAT TTAATTAACT 
AGACTTGGAA ATTGAATTAT TTATTTCCCC CGGATAAGAC ACAAATTTGA 
CAAATATGGA TAAAGCACGT TTTGATAATG TGTATTCGAG CTGTTTAATT 
TGAACCACGA TGTACATATG ATTCATCAGT CAATACATAA TATTTATACT 
ACTAATACAC AAATTGTGTG CAATATCGTA TTAATAACAA TAAAAATGGA 
ATATATATAT ATACTTAGGT TATTGACCAA TATTGACGAC AAAAAATTCA 
AATGAATGTA CATATATTCG TCATTAGTGG ACGAGGAAGG CAACTTCGCA 
GGAAATGATA TTGCGAGCTT ACATACAAAA AATATAAAGG CCACATGGTT 
TTCACGTAGC TATCACACTT AAACGTGATT ACGTGACGTA CCCTTGTTTA 
ACTAACGTAA CCTTCATGGT CTTGCTTTTT TTTGTTCATA ATTATTATCT 
TCATGGNCTT ACCACGTTCT TTGAACGTTT CTTAACTCTT GACTTCTAAT 
CAGTAGACAA TTTTACACAT TAGACACATC ATATNTAGAC ATAGGCCATT 
NTAT

3 prime edge [+] show sequence

Chromosome: 2; Position: 161662 [Map]; Strand: w
- AT2G01330.1 - [+] show detail - nucleotide binding
  Distance: -804; Region: promoter
- AT2G01330.2 - [+] show detail - nucleotide binding
  Distance: -761; Region: promoter

CTAACTAGTC AAAAATGATC AAACGTGTCT CAAAAGTATA TATTTAATGC 
TAGGTAGTGT GATTTAACAA TTGAGAGAAC AAAAACAAAA AACATACCAA 
ATGATAGTTT CGGTTTATAT CCATTCGGTT ATCAATTCGT ATCCATTCGA 
TTATCAATTC GGTTCAGATT TTTATTTATT CGGTTTCGGT TTGTATCCAT 
TCGATTATCA GATATTTTGG TTATAAAGTT TAGTATCCAT TCGATTATTT 
TGAAATTTTG GTTAGATTTC GGTTCGGATC

AT2G01330.1

Model type: Protein coding
Short Description: nucleotide binding
Computational Description: nucleotide binding; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40 repeat, conserved site (InterPro:IPR019775), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat (InterPro:IPR001680), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: transducin family protein / WD-40 repeat family protein (TAIR:AT3G18060.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT2G01330.2

Model type: Protein coding
Short Description: nucleotide binding
Computational Description: nucleotide binding; FUNCTIONS IN: nucleotide binding; INVOLVED IN: biological_process unknown; LOCATED IN: CUL4 RING ubiquitin ligase complex; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40 repeat, conserved site (InterPro:IPR019775), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat (InterPro:IPR001680), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: transducin family protein / WD-40 repeat family protein (TAIR:AT3G18060.1).
Link: InterPro Scan - TAIR