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54-0360-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 24088121 [Map]; Strand: w
      • AT5G59780.3 - [+] show detail - myb domain protein 59
        Distance: -4697; Region: intergenic
      • AT5G59790.1 - [+] show detail - Domain of unknown function (DUF966)
        Distance: -2594; Region: intergenic
    Flanking Genome Sequence: 54-0360-1 - 3-prime edge 
    TGGTATGCGA GCTTGGAAAG CTTTGGAAAA CAAAAGCTAA ATAGTGATCT 
    TATAAAGTTA ACGACAAAAA TGCATAGCTT TCGCACCAAG TCTCTCTATG 
    TTGCTNCACT ACTGAGTTCG ATGTATCNAN TCCCGTAATT

AT5G59780.3

Model type
Protein coding
Short Description
myb domain protein 59
Curator Summary
Encodes a putative transcription factor (MYB59).
Computational Description
myb domain protein 59 (MYB59); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: response to cadmium ion, regulation of transcription, DNA-dependent, response to chitin, response to salicylic acid stimulus; LOCATED IN: nucleus; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Myb, DNA-binding (InterPro:IPR014778), Homeodomain-like (InterPro:IPR009057), Myb transcription factor (InterPro:IPR015495), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: myb domain protein 48 (TAIR:AT3G46130.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT5G59790.1

Model type
Protein coding
Short Description
Domain of unknown function (DUF966)
Computational Description
CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF966 (InterPro:IPR010369), Uncharacterised conserved protein UCP031043 (InterPro:IPR021182); BEST Arabidopsis thaliana protein match is: Domain of unknown function (DUF966) (TAIR:AT3G46110.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR