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54-0373-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 24808601 [Map]; Strand: w
      • AT5G61730.1 - [+] show detail - ABC2 homolog 11
        Distance: -703; Region: promoter
      • AT5G61740.1 - [+] show detail - ABC2 homolog 14
        Distance: 0; Region: intron1 (CDS)
    Flanking Genome Sequence: 54-0373-1 - 3-prime edge 
    TGTAAGTCTC CTCTGCACCC ACCCAAAATG TCATATAATC GATTCAAAAC 
    CATGTTTTCA AACAACGATC GTAACAATTT TGTCACACAT ACACATACCT 
    GGTAGGTTAA GTTCTTTCTA AGTAACGCAT TTGCTTGCGC CCAGAAACTG 
    GCTTGACTAG GATCCGCCAT TGATGAAGAA NAANNANAGC TCCGTTAGTC 
    TTTAAAATTT TTCTTACTGA CACCACTTTT TAGTATTCTT CTCCAAAACG 
    CTTCTCTTCT AATA

AT5G61730.1

Model type
Protein coding
Short Description
ABC2 homolog 11
Curator Summary
member of ATH subfamily
Computational Description
ABC2 homolog 11 (ATH11); FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances, transporter activity; LOCATED IN: plasma membrane; EXPRESSED IN: male gametophyte, cultured cell, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: ABC2 homolog 15 (TAIR:AT5G61690.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT5G61740.1

Model type
Protein coding
Short Description
ABC2 homolog 14
Curator Summary
member of ATH subfamily
Computational Description
ABC2 homolog 14 (ATH14); FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances, transporter activity; LOCATED IN: plasma membrane; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: ABC2 homolog 16 (TAIR:AT5G61700.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR