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Mutant Lines
54-0379-1

54-0379-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

5 prime edge [+] show sequence
1. Chromosome: 4; Position: 18033771 [Map]; Strand: c
  - AT4G38570.1 - [+] show detail - probable CDP-diacylglycerol--inositol 3-phosphatidyltransferase 2
    Distance: -208; Region: promoter
  - AT4G38570.2 - [+] show detail - probable CDP-diacylglycerol--inositol 3-phosphatidyltransferase 2
    Distance: -30; Region: promoter
  - AT4G38580.1 - [+] show detail - farnesylated protein 6
    Distance: -660; Region: promoter
Flanking Genome Sequence: 54-0379-1 - 5-prime edge
```
GGGATAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
CCCATCCTAC TTTCATCTCT GGACCCCCAT GGGATTCAAG TTCATATATC 
CGAAAATCCC ATCATCAATT ATAGTCTTAA GCGATGAAGA TACAAAGGTT 
TGTGGAAATT AGTAATGAGT GAGTAATGAC TAATGACACA ATCCGAATT
```

3 prime edge [+] show sequence

Chromosome: 4; Position: 18033776 [Map]; Strand: c
- AT4G38570.1 - [+] show detail - probable CDP-diacylglycerol--inositol 3-phosphatidyltransferase 2
  Distance: -213; Region: promoter
- AT4G38570.2 - [+] show detail - probable CDP-diacylglycerol--inositol 3-phosphatidyltransferase 2
  Distance: -35; Region: promoter
- AT4G38580.1 - [+] show detail - farnesylated protein 6
  Distance: -655; Region: promoter

GAAAACGGTA GAGGTATTTT ACCGACCGTT ACCGACCGTT TTCATCCCTG 
GATATCCAGA TGGTTCTACT TGCAAGTCTT GCAAATCTAA ATGGAATTAA 
AACTCGTTGA TTTTTGTCAA AAAATCGCCA AAAATATAAA ATGGTAAGTA 
AGTGGGCCTC AGAAAAATCC ATTAGAAAGC CTAGACCAAA TTTTGGAGTG 
GGCNTTCATA AAATAAACAA ATACTGGTCA TCAAGGTCGG TACGTCGGTG 
TGACTTTGCG AGTCATCATC GATTATCCAA AAACAATAAC TCCTCTCTTT 
ACTTTCTTCC CATACACCAA GAATATACTA TTTTTCATTT CTATTTATTT 
AAAAAAACAA AAAAAGTAAA GCAGCAGAAA ATCTAACGCA CGACTCTTGT 
CCCAAGATCA GTCTCAGTCA TCATCAAAAC AGAAAATTTA ATTTTGCATT 
GTAATTTTAT TTTTTTCTTA CAAATAACAA CTCTCTTTTT TTTCATTCAT 
GGAATTGGAA TGAAGAAATG TTTTAAGCCA ATCCGAAAAA GAAACAAAAA 
CAAAAAAAAC TAGAAATTAG GAAACCGTTA GCAAGAAGAG AAGAATCGAG 
ACGGCGACTA GGAAACTGCT GGGACCAGAA AAGAAAGGTG ACCCATCCAT 
CATTTACTTA ATTAGATACT ACATCTTATT ACTTATTACA ATAATGTCTA 
TATATTCTCC CAATTCATCA TTTACTTCTT TACACCTCCA CTTTCCCTTT 
TGCCCCCTCT TTTTN

AT4G38570.1

Model type: Protein coding
Short Description: probable CDP-diacylglycerol--inositol 3-phosphatidyltransferase 2
Computational Description: probable CDP-diacylglycerol--inositol 3-phosphatidyltransferase 2 (PIS2); FUNCTIONS IN: phosphotransferase activity, for other substituted phosphate groups; INVOLVED IN: phosphatidylinositol biosynthetic process; LOCATED IN: endomembrane system, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: CDP-alcohol phosphatidyltransferase (InterPro:IPR000462), CDP-diacylglycerol-inositol 3-phosphatidyltransferase, eukaryote (InterPro:IPR014387); BEST Arabidopsis thaliana protein match is: phosphatidylinositol synthase 1 (TAIR:AT1G68000.1); Has 2530 Blast hits to 2530 proteins in 950 species: Archae - 14; Bacteria - 1497; Metazoa - 167; Fungi - 185; Plants - 77; Viruses - 0; Other Eukaryotes - 590 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT4G38570.2

Model type: Protein coding
Short Description: probable CDP-diacylglycerol--inositol 3-phosphatidyltransferase 2
Computational Description: probable CDP-diacylglycerol--inositol 3-phosphatidyltransferase 2 (PIS2); FUNCTIONS IN: phosphotransferase activity, for other substituted phosphate groups; INVOLVED IN: phosphatidylinositol biosynthetic process; LOCATED IN: endomembrane system, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: CDP-alcohol phosphatidyltransferase (InterPro:IPR000462), CDP-diacylglycerol-inositol 3-phosphatidyltransferase, eukaryote (InterPro:IPR014387); BEST Arabidopsis thaliana protein match is: phosphatidylinositol synthase 1 (TAIR:AT1G68000.1).
Link: InterPro Scan - TAIR

AT4G38580.1

Model type: Protein coding
Short Description: farnesylated protein 6
Curator Summary: putative farnesylated protein (At4g38580) mRNA, complete
Computational Description: farnesylated protein 6 (FP6); FUNCTIONS IN: metal ion binding; INVOLVED IN: heat acclimation; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Heavy metal transport/detoxification protein (InterPro:IPR006121); BEST Arabidopsis thaliana protein match is: Heavy metal transport/detoxification superfamily protein (TAIR:AT4G35060.1); Has 1169 Blast hits to 1088 proteins in 38 species: Archae - 2; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1167; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link: InterPro Scan - TAIR