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54-0469-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 26462372 [Map]; Strand: c
      • AT5G66230.2 - [+] show detail - Chalcone-flavanone isomerase family protein
        Distance: 0; Region: intron4 (CDS)
      • AT5G66230.1 - [+] show detail - Chalcone-flavanone isomerase family protein
        Distance: -213; Region: promoter
    Flanking Genome Sequence: 54-0469-1 - 3-prime edge 
    TGAAAGATGA TTTTGTGTTA ATGAAAAAAT CAGTGATCAA ATAAAAGAGG 
    TGGGCCTTCC AAAATCTAAT GTAATAGTGT GGGCTTTTAA TCATGGCCTT 
    TTTAGGGACG AAAAAGTCCA TAATTCAGCG AAGGAAATAA CACAACGGCT 
    AGTTTGATAA ACGGCTCCTT CCATTTCTGT NCCCAACGGC TACTTTCTTT 
    CAAAAACCCT TCACAGCGTT TCAATACCCC TGTTTATTTA TACTTTACCC 
    AAATTCCCAA ACGCCACAAT CACTTGTCTG ATTCTCTCAT ATAATAGAGT 
    TTTCTTTCTC TTCTCCTCTG CTTAATTTCC CAGAAATTAC TCTTTCTNTG 
    CTACTCCACT AAG

AT5G66230.1

Model type
Protein coding
Short Description
Chalcone-flavanone isomerase family protein
Computational Description
Chalcone-flavanone isomerase family protein; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 8 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G51230.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT5G66230.2

Model type
Protein coding
Short Description
Chalcone-flavanone isomerase family protein
Computational Description
Chalcone-flavanone isomerase family protein; FUNCTIONS IN: chalcone isomerase activity, intramolecular lyase activity; INVOLVED IN: cellular amino acid derivative biosynthetic process, flavonoid biosynthetic process; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Chalcone isomerase, subgroup (InterPro:IPR003466), Chalcone isomerase, 3-layer sandwich (InterPro:IPR016088), Chalcone isomerase (InterPro:IPR016087); BEST Arabidopsis thaliana protein match is: Chalcone-flavanone isomerase family protein (TAIR:AT5G66220.1).
Link
InterPro Scan - TAIR