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54-0483-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 16691017 [Map]; Strand: c
      • AT2G39975.1 - [+] show detail - CONTAINS InterPro DOMAIN/s: C2 calcium-dependent membrane targeting (InterPro...
        Distance: 2769; Region: intergenic
      • AT2G39990.1 - [+] show detail - eukaryotic translation initiation factor 2
        Distance: 7075; Region: intergenic
    Flanking Genome Sequence: 54-0483-1 - 5-prime edge 
    CTGGAAAAAC TAACAAAATC GGTTATACGA TGTGAAGCAA TCAACATTAA 
    CCGAATAATA ATAACTACTC GCTATGACAA TAGTCTAGAT TACCTTTCCA 
    ATATACGTTT CTCGTCACTT ATGCAAATCC TTTTGTTAAT TGGATTATTG 
    AGATTTATGG AGATC

AT2G39975.1

Model type
Protein coding
Computational Description
CONTAINS InterPro DOMAIN/s: C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G40745.1); Has 7 Blast hits to 7 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 7; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G39990.1

Model type
Protein coding
Short Description
eukaryotic translation initiation factor 2
Curator Summary
translation initiation factor eIF2 p47 subunit homolog
Computational Description
eukaryotic translation initiation factor 2 (EIF2); FUNCTIONS IN: translation initiation factor activity; INVOLVED IN: pollen germination, translational initiation, embryo development; LOCATED IN: eukaryotic translation initiation factor 3 complex, nucleus, membrane, cytoplasm; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Mov34/MPN/PAD-1 (InterPro:IPR000555); BEST Arabidopsis thaliana protein match is: Mov34/MPN/PAD-1 family protein (TAIR:AT3G11270.2); Has 1103 Blast hits to 1103 proteins in 237 species: Archae - 0; Bacteria - 0; Metazoa - 465; Fungi - 269; Plants - 187; Viruses - 0; Other Eukaryotes - 182 (source: NCBI BLink).
Link
InterPro Scan - TAIR