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Mutant Lines
54-0525-2

54-0525-2

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

5 prime edge [+] show sequence

Chromosome: 4; Position: 111843 [Map]; Strand: c
- AT4G00240.1 - [+] show detail - phospholipase D beta 2
  Distance: -1125; Region: intergenic
- AT4G00250.1 - [+] show detail - DNA-binding storekeeper protein-related transcriptional regulator
  Distance: 862; Region: intergenic

GGGAAAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
CCCATCCTAC TGATGCAGGG GTAGCCAAGC AATATGAAAC ATTTAGTGTG 
GCCCATTTTT TTTTTTAAAA TTTTTTAANA AAAANTTTTN ANAAAAGGGC 
CCCAATTTTN TNGNTTTTAA NNAAAATNGG CCCNAAATTT NAAAACCTTT 
NAAAAAAAAN TGGGNTTTTT NGNTTTTTTN GNNNGGNCCC AAAAAACCCN 
NGGGGTTTAG GGAAAANNTT TTNAAATNAA NTTTCAAAAA ATNAAAAAAC 
TTTTNAAANN AAAAAANTNN TTCAANCCCN ANTNNAAANC NNCCCGGGCC 
GGNAANNNCC CCNNNGCCTN AAAAACCGGG NCNNNAAAA

3 prime edge [+] show sequence

Chromosome: 4; Position: 111851 [Map]; Strand: c
- AT4G00240.1 - [+] show detail - phospholipase D beta 2
  Distance: -1133; Region: intergenic
- AT4G00250.1 - [+] show detail - DNA-binding storekeeper protein-related transcriptional regulator
  Distance: 854; Region: intergenic

ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCCT 
GCATAAGAGT TAAGACAAGT ACGCGGACTA ACAAAGTTCA TTTTCTTGTT 
CAAGTATGTA CTCTACTGTT GTTTATTTTT CTGCAGCTTC ACAATATCAT 
AGTGCAATTC TATAGCTTTC TTGGTTATAC ATAACAATAT TGATATTAAC 
CATTCAACTT CTTCTACGTG AGGAAGATAT CTGTTGAAAA TCACACTTTC 
ACTCTCAAAC TACCTCTTCC AACATTCTTT TGAGGTCAGC ACTCTCACTC 
TCTTGTCACT CTGTTTTGCT TTTGTTTTCT TTAGAGAGAA ACAAGAACAC 
GTTTAAGAGC ATGATGTCTT GATAATAAAA CTTGGGTGAT TCTCTTACAA 
GATACAAACA CACATACTTA TTATAGTTTT ACTTGAAACA CTTACACACA 
CAAGCATGCT CTTAAACGCA TAATTAACTC TGATTTCTTG CAAGCTACTC 
TACTACATAT TGGGACTCTG ACAACAAGCA TGCTCATANA CACAATNTAT 
GTNTCTTTTT ATNTNCTCAN CTACTNTGCA NTTNCNNGAT GCGGGAANCT 
CTNANTNNNG NTATNATAAA CANAANNNCT NNTGGGAANG ATNGNNNCCN 
AAAGNANNNG GGNNNNCNNN GGNNGCNTTN GNNNTT

AT4G00240.1

Model type: Protein coding
Short Description: phospholipase D beta 2
Curator Summary: member of C2-PLD subfamily
Computational Description: phospholipase D beta 2 (PLDBETA2); FUNCTIONS IN: phospholipase D activity; INVOLVED IN: phosphatidylcholine metabolic process, metabolic process; LOCATED IN: membrane; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage, LP.08 eight leaves visible; CONTAINS InterPro DOMAIN/s: C2 membrane targeting protein (InterPro:IPR018029), Phospholipase D (InterPro:IPR015679), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), Phospholipase D, plant (InterPro:IPR011402), C2 calcium-dependent membrane targeting (InterPro:IPR000008), Phospholipase D/Transphosphatidylase (InterPro:IPR001736); BEST Arabidopsis thaliana protein match is: phospholipase D beta 1 (TAIR:AT2G42010.1); Has 2407 Blast hits to 1935 proteins in 427 species: Archae - 0; Bacteria - 522; Metazoa - 526; Fungi - 534; Plants - 642; Viruses - 3; Other Eukaryotes - 180 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT4G00250.1

Model type: Protein coding
Short Description: DNA-binding storekeeper protein-related transcriptional regulator
Computational Description: DNA-binding storekeeper protein-related transcriptional regulator; FUNCTIONS IN: transcription regulator activity; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF573 (InterPro:IPR007592); BEST Arabidopsis thaliana protein match is: DNA-binding storekeeper protein-related transcriptional regulator (TAIR:AT4G00238.1); Has 626 Blast hits to 580 proteins in 96 species: Archae - 0; Bacteria - 6; Metazoa - 135; Fungi - 97; Plants - 294; Viruses - 0; Other Eukaryotes - 94 (source: NCBI BLink).
Link: InterPro Scan - TAIR