1. Home
  2. Mutant Lines
  3. 54-0571-1

54-0571-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 26533431 [Map]; Strand: c
      • AT5G66440.1 - [+] show detail - unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein ...
        Distance: -2334; Region: intergenic
      • AT5G66450.2 - [+] show detail - Phosphatidic acid phosphatase (PAP2) family protein
        Distance: -1183; Region: intergenic
    Flanking Genome Sequence: 54-0571-1 - 5-prime edge 
    ACTGGTAGTT AGTAGTTACA CGAGGTTTTA AACTGAAGTT AGGCTGGAGT 
    GTGGGTTACC ACACGCCAGA GCGTCTTGTC ATTGGAGATG AAAACTGGGT 
    GTCGTTTATA AATACATTTA TTCTCGTAGA TAAAAGATGT GTTGATGCGT 
    CTATCACTCT GTCAAACTCA ATCTACAAAG TACAGTTATA CACNGGTGTT 
    GTGGCAGAAA TTGAACATGA CTTGAGAGCC AAATATGAAA AAATAATACA 
    TATTCAAGTT TGAAAGTGAA AAAGGGGTTA ATACGGNGTC NTGTNGAACC 
    AGATAGTCCT GAAATTCATG ATGATTTTCT TATCACTGAC AACGTATAGC 
    TTTTACAGTG GTCAAAGTAT TGANCCNNGA CCCCNGCAAG GAAACAATCT 
    NNAGCCCTAC TTNCTTATAG TCTCCTNCTA TCATATCTAG TACAACACTT 
    TTNCCATGTT NTTAGGGGNT ACATCCATNG AATACCAAGA TATTTATGGT 
    CATAACTNCN CATNGATACT ANNACGNCCN CCCCTNCNCN TGCNTGCANG 
    TATGCNNCNG CNGNNNCNNG NTGANGCTTA NCNATGGGNN AANATACNNN 
    TAANNNTAAA ANAAAANNCN CCCNGGCCNG NNTNNNAAGA ANNCNACNTN 
    TAAANNAGGA GNCAAAANAT NTTTTTTTNG NGGGGGNGGG NCCNCNCCCN 
    CCTTANNNNT TAAANAANNA

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 26533547 [Map]; Strand: c
      • AT5G66440.1 - [+] show detail - unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein ...
        Distance: -2450; Region: intergenic
      • AT5G66450.2 - [+] show detail - Phosphatidic acid phosphatase (PAP2) family protein
        Distance: -1067; Region: intergenic
    Flanking Genome Sequence: 54-0571-1 - 3-prime edge 
    CTACCAGTAT TAGCGGTTTA CTTTTCTCCA TGTCTGTATC ACTGTATGTA 
    TGTAATTAAA CATGACAACA AGTATTAAAA CTAGCACGAA GAAGCAAGAC 
    CTTAACTGAC ACATGATTTT TTCGACGATT ACNTTTAAAA TAAGAAAAAT 
    AAAATTAAAA AAACAAAACG TCTATATTTT ACAGATATCA AATAAAAATT 
    CTCAAAAACA AAAGTATTGA TGTTATAATT TAAAGAGAAG AAAACATCGT 
    TCTACTATAA ACCATGTCCT TTAAACCAAG AAACATAAGG ATATTTTTTT 
    GTTCGAGACG ATATTCGATC GTTGCTTTTG TGACTATAAT CATTTTTAAT 
    CCACAACCAA AAGCTATAAT CGAAAGTAAA TATTATTTTG AATAAAAGGA 
    GTATAGATTA AATAATTAAT ATAGTTATGT TGTGCAATAG GAAAACTTTT 
    TTATGCGAGA ATCTATTTAC ACATCAGCCT GAATGTATAA AAACTAAAAA 
    GGATAACCAA GAATATATTT CTAAGACCTA AGTATACCGT ATAGTAATTT 
    AATTGGTCAT CTTCTTTGTT CCACCTTTTC TTTTTTCCTT AGCAAAGTTT 
    GTTAAGCATA TTCGACCTCC AATATACTCC ATATAATGTA TACTCCATAT 
    AATGTATTTT TCTTCATCAC ATGTATGTAT GTCTATAAAA TTCCAAAATA 
    AGC

AT5G66440.1

Model type
Protein coding
Computational Description
unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G34560.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT5G66450.2

Model type
Protein coding
Short Description
Phosphatidic acid phosphatase (PAP2) family protein
Computational Description
Phosphatidic acid phosphatase (PAP2) family protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: biological_process unknown; LOCATED IN: membrane; CONTAINS InterPro DOMAIN/s: Phosphatidic acid phosphatase type 2/haloperoxidase (InterPro:IPR000326); BEST Arabidopsis thaliana protein match is: Phosphatidic acid phosphatase (PAP2) family protein (TAIR:AT3G50920.1); Has 319 Blast hits to 319 proteins in 143 species: Archae - 0; Bacteria - 10; Metazoa - 89; Fungi - 89; Plants - 87; Viruses - 0; Other Eukaryotes - 44 (source: NCBI BLink).
Link
InterPro Scan - TAIR