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Mutant Lines
54-0584-1

54-0584-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

5 prime edge [+] show sequence
1. Chromosome: 5; Position: 10965504 [Map]; Strand: c
  - AT5G28928.1 - [+] show detail - transposable element gene
    Distance: -2390; Region: intergenic
  - AT5G28929.1 - [+] show detail - transposable element gene
    Distance: 1022; Region: intergenic
Flanking Genome Sequence: 54-0584-1 - 5-prime edge
```
CTNTTNCTGG NNANCAGCNA TNCCTTATTT ACTTNCCGCA CNNTGACGGA 
GTTGCTNTCT ANGGTTTNAA GNCTTATTTA AGGTTAATTC TATGGATGTT 
NAAACGCAGC TTTTGGTTTA TGAATAAAAC AGAGAAGTTC TTCTCTTCTA 
AAGTCTTTGA ATT
```
3 prime edge [+] show sequence
1. Chromosome: 5; Position: 1793363 [Map]; Strand: c
  - AT5G05965.1 - [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biolo...
    Distance: -729; Region: promoter
Flanking Genome Sequence: 54-0584-1 - 3-prime edge
```
ATACTATACA TATGATCATT TAACCTATAC AAAATATAAT GGTTCATCTA 
AGATCACAAC AGATAAAAAT AAAAAATTAT TTCAGGTAAA AGATTGATTA 
AGAGAGTCCA CCATTGTGGG GATTAATTTG TAGAAACTTC TCATGGAATC 
TATTTCCCAC CTTATTCTTC GTCGA
```

AT5G05965.1

Model type: Protein coding
Computational Description: unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G39855.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link: InterPro Scan - TAIR