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54-0601-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 22441718 [Map]; Strand: c
      • AT5G55340.1 - [+] show detail - MBOAT (membrane bound O-acyl transferase) family protein
        Distance: -713; Region: promoter
    Flanking Genome Sequence: 54-0601-1 - 5-prime edge 
    ANANNNNNAA NNNNNNNANN NNNAANANAA ANNNNNNANN ANNNNNNNTT 
    TNAAANNNGN NGTTTTNNAN CCGGGNNNAA ANNACNGTCG TACCCATAAC 
    GGCACGGNNC GGGNATTNAN CCATCCTACT TCTCATNNCT GCATNANACG 
    NGTGTCAATC NANAANANNN NNANGNTGGA GAAAATGAGA AATTGGTAAA 
    AGTGACTNTA CCTCTAGTAC ACTTTGTGAA ATTGCTAGAG ATGGGATTTT 
    GGGAGGAAAA TGGTAGAATG ATTAAAACCC CAAGGTAAAA ATCTCCATAA 
    TGCATTAATC TTCTACCCAT TTTAGCTAAG GCTTACTTTC GAATGCTGTT 
    ATAACTTATA AAACTAACAA TGATACTTTT TTGTTTTTAT AAGAATGTAA 
    ATATCATTAG TAAAGAAATG TAGTGGTTAT ACAAAAATGC TTAACTAAAG 
    TTTATTGCGT CCTTGTAAAA AAAACTAACA ACGATTCTTA TTACCTTTAT 
    CACGCGACCA NAATTTCNTA CTTAGACCAA NTGACCAACC ATNCTCCGAT 
    NCCTNATTCC AANGGAGATA TGTNTACAAT ATNTTGATNC NTTTTANNAN 
    CTCANCANCT CCNCAANCTA AACCAATGAC NNAANATTAA AAGCNNCNTC 
    ANCGGTAAAC CCTTTGNANC NACGCCTNNC NCNCCTNCCG NTATGTAAAN 
    NGGANGGGNG ACCGTNTNNA ANNAACTGNC AAANTNNNGG GTATGNCCGN 
    TTNNAAAANG ANCCNTTAAA ANAANNTGCC NNGTTNTCNA AGGGNANAAC 
    CTTNGNGNNA ATGGCNAGTG ANCAAGCCAN CNCAGNATAN ANAANATCCN 
    NACNNCGGGN CCATTNANCN NNNCCNTNCC CTGNATAGAA NGNNAATAGT 
    GNNGTNGNCA NCAANNNGNG ANANAAAATC G

  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 8588673 [Map]; Strand: c
      • AT3G23810.1 - [+] show detail - S-adenosyl-l-homocysteine (SAH) hydrolase 2
        Distance: 0; Region: exon2 (CDS)
    Flanking Genome Sequence: 54-0601-1 - 3-prime edge 
    CTNATANACC TAGTTTNTCC ANGNNCNCAA CTANCNGCNN CCCTNGNAGA 
    AGTNATNTCT TCAACTTNAT TACATNAGAG CTTCNCNGAA TNTGATCTGT 
    TGNGANTNAA TAACCANTTN NCCANCTNAN TAGCATNCGC AANAACATCN 
    TAAGCTGGAA NNAGGACNAA CATGCTCATC NTGANTCNNA GCAATTAACA 
    TCACCTNGCT GCGNGCNNCT AANNGGATCC ANNAACNATA TCATTCACAT 
    TNNGGTGATT CCAAAACATT GNATTATCCA CAAATTAGGC AAAACAATAT 
    CAGATC

AT3G23810.1

Model type
Protein coding
Short Description
S-adenosyl-l-homocysteine (SAH) hydrolase 2
Computational Description
S-adenosyl-l-homocysteine (SAH) hydrolase 2 (SAHH2); FUNCTIONS IN: adenosylhomocysteinase activity; INVOLVED IN: one-carbon metabolic process; LOCATED IN: plasma membrane, vacuole, membrane; EXPRESSED IN: 33 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: S-adenosyl-L-homocysteine hydrolase (InterPro:IPR000043), S-adenosyl-L-homocysteine hydrolase, conserved site (InterPro:IPR020082), S-adenosyl-L-homocysteine hydrolase, NAD binding (InterPro:IPR015878); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-homocysteine hydrolase (TAIR:AT4G13940.1); Has 7939 Blast hits to 7933 proteins in 1466 species: Archae - 229; Bacteria - 2315; Metazoa - 640; Fungi - 145; Plants - 247; Viruses - 0; Other Eukaryotes - 4363 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT5G55340.1

Model type
Protein coding
Short Description
MBOAT (membrane bound O-acyl transferase) family protein
Computational Description
MBOAT (membrane bound O-acyl transferase) family protein; CONTAINS InterPro DOMAIN/s: Wax synthase (InterPro:IPR017088); BEST Arabidopsis thaliana protein match is: MBOAT (membrane bound O-acyl transferase) family protein (TAIR:AT5G55350.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR