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Mutant Lines
54-0624-1

54-0624-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

3 prime edge [+] show sequence

Chromosome: 1; Position: 22271250 [Map]; Strand: c
- AT1G60450.1 - [+] show detail - galactinol synthase 7
  Distance: 0; Region: exon4 (CDS)

TTCTTGAGGT ACTTGCGTTT CCGATTTCTC AAGCGGCAGA AGATGCAGCA 
GGAGAGTAGG AAAGTGGTGC TTCGGTTACC GAAGCTATAA TTGTTGATTC 
CAAAACGGTT GCTTCCAAAT CTGCAGGGCT TTTCGGTTTA AAATCAAGAG 
ACTCGTCATT GTAGATATCC CACCATTTCT TAATTAACAT TTTGACGTCT 
TCTCTGTCCA TGTTAGGTTC TTCTCCTGTG TACCTCCATG GCTTGGATC

5 prime edge [+] show sequence

Chromosome: 1; Position: 22271134 [Map]; Strand: c
- AT1G60440.1 - [+] show detail - pantothenate kinase 1
  Distance: -1891; Region: intergenic
- AT1G60450.1 - [+] show detail - galactinol synthase 7
  Distance: 92; Region: intergenic

CTCAAGAATG TATGTTTGAA GCAAGTTGGT GTGTTTTTGA TATATTCTCA 
TTTTTTGTAT TTGTTTGGTG TGGTGAATTT TGTTTCGTTT TTGTTAAATT 
ACTATTTGCC AACTTGCAAA GAAATACTTT ATTTCAAATT ACAAATAATC 
TATTTGTATT TATGCTTATA TGTTCAATCT TGTATAATAA AGTAATGTTT 
TCTTTAAAAG AGTTATGATT TGACAATATG ATGTTTCAAT TTCTTGCAGT 
AACTTTACTT AATTAATTTC TTAAAAAATT AGACACGTTA CTGGTTTCAA 
CACATTATAG GCTACTGCTT CAATTAGTAA CTATGATTTA GAAAAAGAAT 
GAGAAAGAAT ATATAATCTA ATGCATGAAA TAGACTACAA ATTTTAATAT 
ATTTTTTAAT TTTGTTGTAA GTCTAGATTA TACATTAATG CCGTCTACCT 
AACTAAATCA CATGAATATT TAAATTGTTA TCATTGTCTG TTTTATTCAC 
ACTAAATATT TTCTTCTTCT TCTTATCTCT CTTTTTTTTT TCTTTTTTTT 
CTANNAACAG TTTAAGGGAN ANATNGTATT CTTAAAAANT TGATTCCCNG 
NAAGGAAAAA AGGAACCCTT NNGNNCCCCC TCATTNGGGG GTTTTTAAAA 
AAGTTTNTTA ACAAANAANA AAAAATTTNT TTGATTNAAA TNTTNCNTAA 
GC

AT1G60440.1

Model type: Protein coding
Short Description: pantothenate kinase 1
Curator Summary: The gene AT1G60440 encodes pantothenate kinase 1. Its molecular function was shown to phosphorylate pantothenate to form 4
Computational Description: pantothenate kinase 1 (PANK1); FUNCTIONS IN: pantothenate kinase activity; INVOLVED IN: acetyl-CoA biosynthetic process, coenzyme A biosynthetic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Fumble (InterPro:IPR011602), Eukaryotic pantothenate kinase (InterPro:IPR004567); BEST Arabidopsis thaliana protein match is: pantothenate kinase 2 (TAIR:AT4G32180.3); Has 1272 Blast hits to 1253 proteins in 425 species: Archae - 2; Bacteria - 436; Metazoa - 318; Fungi - 143; Plants - 93; Viruses - 0; Other Eukaryotes - 280 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT1G60450.1

Model type: Protein coding
Short Description: galactinol synthase 7
Computational Description: galactinol synthase 7 (GolS7); CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 8 (InterPro:IPR002495); BEST Arabidopsis thaliana protein match is: galactinol synthase 4 (TAIR:AT1G60470.1); Has 1127 Blast hits to 1126 proteins in 260 species: Archae - 0; Bacteria - 80; Metazoa - 260; Fungi - 247; Plants - 417; Viruses - 63; Other Eukaryotes - 60 (source: NCBI BLink).
Link: InterPro Scan - TAIR