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54-0655-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 26462755 [Map]; Strand: c
      • AT5G66230.2 - [+] show detail - Chalcone-flavanone isomerase family protein
        Distance: 0; Region: exon5 (CDS)
      • AT5G66230.1 - [+] show detail - Chalcone-flavanone isomerase family protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 54-0655-1 - 5-prime edge 
    GTCCGACTCA ATAAACAAAA TCAGGGAATC GGACTATGGA GACTTACTTG 
    AGGATAAGAG ATTATTGATA GCAGAGCGGG TCTGAGATCT CGTGACTCTT 
    CTTGTCGATG ATGGTGTCTC CATTACGATT TACTAAGAAT CTATTGAATC 
    CGATAAGCAC AGAAAGAGTA ATTTCTGGGA AATTAAGCAG AGGAGAAGAG 
    AAAGAAAACT CTATTATATG AGAGAATCAG ACAAGTGATT GTGGCGTTTG 
    GGAATTTGGG TAAAGTATAA ATAAACAGGG GTATTGAAAC GCTGTGAAGG 
    GTTTTTGAAA GAAAGTAGCC GTTGGGTACA GAAATGGAAG GAGCCGTTTA 
    TCAAACTAGC CGTTGTGTTA TTTCCTTCGC TGAATTATGG ACTTTTTCGT 
    CCCTAAAAAG GCCATGATTA AAAGCCCACA CTATTACATT AGATTTTGGA 
    AGGCCCACCT CTTTTATTTG ATCACTGATT TTTTCATTAA CACAAAATCA 
    TCTTTCATAA TCTTTAGAAT CTTACTAAAA ACATAAAACT GTCTTAATTA 
    AGTCACAACA ATCTTTATTT TAGCTGTCAT CATAAGTCAC ATAACATCCT 
    CCGCTGGCTT CATTTTCTAA AATTATTCAA GATTGGGCGA GTTGGAATAG 
    TTTCAATTTT TTGTAGCTAC GTTGACGTTA GCTTCGTTG

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 26462871 [Map]; Strand: c
      • AT5G66230.2 - [+] show detail - Chalcone-flavanone isomerase family protein
        Distance: 0; Region: exon6 (CDS)
      • AT5G66230.1 - [+] show detail - Chalcone-flavanone isomerase family protein
        Distance: 0; Region: exon2 (CDS)
    Flanking Genome Sequence: 54-0655-1 - 3-prime edge 
    AGTCGGACTA TTGTTTCTGG ATCTGATCGT TTATAATTTA TCTCCTACAG 
    AGAAAGCGGA TGATTGGTCA GATAAATGTC AATCGAAGTC GGTACAAAGA 
    AACGGTGCAA AAGACAGGTC TGCGTTGTTT GACATAACCA ACGACTCACC 
    GATCGTAGGT CTGGCGATGC AGACACCGTC CTCAGGAGTT GTTGGGAAGA 
    GGAACATGAG CAGAATCAAT AACACTCCTG GATCTGGTGA GGCTCTCTTG 
    AGAGGCCAAG TCAAGACTCT CTTGCAGAAG GTTGAGGAAG AAGCAGATC

AT5G66230.1

Model type
Protein coding
Short Description
Chalcone-flavanone isomerase family protein
Computational Description
Chalcone-flavanone isomerase family protein; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 8 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G51230.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT5G66230.2

Model type
Protein coding
Short Description
Chalcone-flavanone isomerase family protein
Computational Description
Chalcone-flavanone isomerase family protein; FUNCTIONS IN: chalcone isomerase activity, intramolecular lyase activity; INVOLVED IN: cellular amino acid derivative biosynthetic process, flavonoid biosynthetic process; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Chalcone isomerase, subgroup (InterPro:IPR003466), Chalcone isomerase, 3-layer sandwich (InterPro:IPR016088), Chalcone isomerase (InterPro:IPR016087); BEST Arabidopsis thaliana protein match is: Chalcone-flavanone isomerase family protein (TAIR:AT5G66220.1).
Link
InterPro Scan - TAIR