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54-0696-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 104428 [Map]; Strand: w
      • AT2G01170.1 - [+] show detail - bidirectional amino acid transporter 1
        Distance: 0; Region: exon1 (CDS)
      • AT2G01170.2 - [+] show detail - bidirectional amino acid transporter 1
        Distance: 0; Region: exon1 (5UTR)
    Flanking Genome Sequence: 54-0696-1 - 5-prime edge 
    NAGACGAGAG ATCGCGCTTG AGCTCTTGCT TGTAGCCGAG CTCCTTGAGG 
    CGGACTTGGC CGGAATCCAT GACGGGAATA AAGGATTGAT CGCCGCCCAA 
    TCCCATAGTC TTCCTGGCCT GAGAGTCCAA AGCT

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 104306 [Map]; Strand: w
      • AT2G01170.1 - [+] show detail - bidirectional amino acid transporter 1
        Distance: 0; Region: intron1 (CDS)
      • AT2G01170.2 - [+] show detail - bidirectional amino acid transporter 1
        Distance: 0; Region: exon1 (5UTR)
    Flanking Genome Sequence: 54-0696-1 - 3-prime edge 
    ANTCTCCGCC ACTCTTTCCT TTTTCTTCTT TGATTTGTGT TANCTAAACA 
    ATTGTTANAT TTCAGGGTCT TCTCCAATTT CGCCATCTCC TTCTCCATCA 
    TATCGGTGCT CACTGGTATC ACCACCACCT ACAACACCGG CTTAAGATTC 
    GGCGGCACTG TCACTCTGGT CTNTTNNTNG TTCCTGGCCG GCTCCTTCAC 
    AATGTGCGTT GGGTTATCTA TGGCCGANAT CTGCTCCTCT TACCCTACCT 
    CCGGTGGTCT CTACTACTGG AGTGCTATGC TCGCTGGCCC TCGTTGGGCT 
    CCTCTTGCCT CTTGGATGAC TGGCTGGTAC TCCCTTCTCN CACCTTTTTC 
    TTAATTTGG

AT2G01170.1

Model type
Protein coding
Short Description
bidirectional amino acid transporter 1
Curator Summary
Encodes a bidirectional amino acid transporter that can transport ala, arg, glu and lys but not GABA or pro with both export and import activity. Its expression is localized in the vascular tissues suggesting a function in amino acids export from the phloem into sink tissue.
Computational Description
bidirectional amino acid transporter 1 (BAT1); FUNCTIONS IN: arginine transmembrane transporter activity, L-lysine transmembrane transporter activity, L-alanine transmembrane transporter activity, L-glutamate transmembrane transporter activity; INVOLVED IN: amino acid transport, transport, transmembrane transport; LOCATED IN: integral to membrane, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Amino acid permease subfamily (InterPro:IPR004756), Amino acid/polyamine transporter I (InterPro:IPR002293), Amino acid permease domain (InterPro:IPR004841); Has 15465 Blast hits to 15422 proteins in 1894 species: Archae - 296; Bacteria - 11987; Metazoa - 438; Fungi - 2169; Plants - 254; Viruses - 0; Other Eukaryotes - 321 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G01170.2

Model type
Protein coding
Short Description
bidirectional amino acid transporter 1
Curator Summary
Encodes a bidirectional amino acid transporter that can transport ala, arg, glu and lys but not GABA or pro with both export and import activity. Its expression is localized in the vascular tissues suggesting a function in amino acids export from the phloem into sink tissue.
Computational Description
bidirectional amino acid transporter 1 (BAT1); FUNCTIONS IN: arginine transmembrane transporter activity, L-lysine transmembrane transporter activity, L-alanine transmembrane transporter activity, L-glutamate transmembrane transporter activity; INVOLVED IN: transport, amino acid transport, transmembrane transport; LOCATED IN: integral to membrane, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Amino acid permease subfamily (InterPro:IPR004756), Amino acid/polyamine transporter I (InterPro:IPR002293), Amino acid permease domain (InterPro:IPR004841); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR