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54-0723-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 18122907 [Map]; Strand: w
      • AT4G38820.1 - [+] show detail - unknown protein; Has 4 Blast hits to 4 proteins in 1 species: Archae - 0; Bac...
        Distance: -932; Region: promoter
      • AT4G38830.1 - [+] show detail - cysteine-rich RLK (RECEPTOR-like protein kinase) 26
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 54-0723-1 - 5-prime edge 
    NNNNNNNNNN NNTNNNNGGN NGNNNNNNNN NNNNGGGATN TNTNNNCNNC 
    TTGCGAACCG CAGTCAAATT GGTTTTCGAT AACGGTCGGN NCGGGATTTT 
    CCCATCCTAC TTTCATCCCT TTTTNTANNG GNCGCCNAAN NGTATCGCAA 
    AGATCNCNAG CTGNTGATGA TANGAAANTG GGCCATNATG NAGATGTCTC 
    CTAGCTGCAT GTTGGCTNAT GCTCCNGTGG AGATTCTATG ATCNANTAGG 
    ACACCTGATG ATCCAAGCTC AGTGCCTGNA ACGCCATNAN GGCCGNNATA 
    NAATGAGACA NGAAGTGNCN CACAAGGTTT NTTTGNTACG TTNTTATGGA 
    TTATNAAAGT TTTCNAACTC TANGATTCGA AANCAGACTG TAGGAGATTG 
    NTTTTATTNN CNANTGTTAC AGACTNACAG TGTTAANCAT TCTNAGNGTG 
    TNTNGGTGTN GNNTGAGGGG ATAAAAANAG ANGTGTNCCT AAAGCTACCA 
    TCNCGGGCNN AGNNCCNCTC GCNGCCNATA TATTNTTAAA CNNATNGNNN 
    TGNTNGANNN ANNCTNNCAC CAGGNNTNAT NGNNTTGNGG CNGAGGGNCC 
    NGNTTANTAN ATCGGGAGAA NGTTNGCTCT NCNNGAANNA ANNGAANANN 
    TANATANATG NNAGTAGNAN NNNTTCTNCN GTNANNNCNA ATANNNTTAN 
    NNNATNATCT CTAANNGATA NNNNTGTANN CNTANAGNGT NCNTANCGAA 
    TATTTNTATC NTNAATTNNG TCNTNCACNN CTAGTGTTAN NGAGTNNGNA 
    TGGGGNNGNN TNGNAGATNG GAATANNNAT GTNNGTNNAG TNGATTCATC 
    NNATTNTNTN TNNCTTNGGN NACTTNTAAA TNNCTTTNTT AT

AT4G38820.1

Model type
Protein coding
Computational Description
unknown protein; Has 4 Blast hits to 4 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 4; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT4G38830.1

Model type
Protein coding
Short Description
cysteine-rich RLK (RECEPTOR-like protein kinase) 26
Curator Summary
Encodes a cysteine-rich receptor-like protein kinase.
Computational Description
cysteine-rich RLK (RECEPTOR-like protein kinase) 26 (CRK26); FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: stem, root; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Protein of unknown function DUF26 (InterPro:IPR002902), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: cysteine-rich RLK (RECEPTOR-like protein kinase) 29 (TAIR:AT4G21410.1); Has 124218 Blast hits to 122701 proteins in 4579 species: Archae - 106; Bacteria - 13898; Metazoa - 45472; Fungi - 10958; Plants - 35042; Viruses - 435; Other Eukaryotes - 18307 (source: NCBI BLink).
Link
InterPro Scan - TAIR