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54-0725-2

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 26518719 [Map]; Strand: c
      • AT5G66400.2 - [+] show detail - Dehydrin family protein
        Distance: 0; Region: intron1 (CDS)
      • AT5G66400.1 - [+] show detail - Dehydrin family protein
        Distance: 0; Region: exon2 (CDS)
    Flanking Genome Sequence: 54-0725-2 - 5-prime edge 
    TGTATAAAGA AGATTTATGA TGTTTTAGTT TAGTATGTGA AGCGTAATTC 
    GAATGTTATA TGTATAACAG GAGGATGATG GACAAGGAGG GAGGAGGAAG 
    AAGGGAATAA CACAAAAGAT CAAGGAGAAG TTGCCAGGTC ATCATGATCA 
    GTCTGGTCAA GCTCAAGCGA TGGGCGGCAT GGGATCCGGT TACGATGCTG 
    GTGGCTACGG TGGTGAGCAC CACGAGAAGA AGGGGATGAT GGACAAGATC 
    AAGGAAAAGC TTCCCGGTGG TGGCCGTTAA GCTTCGAACA ATCGTGTATA 
    CATATTAAAT AAAAATAATG AGGGTTTCTA ACGCAGTCGC ATTCGGTCGT 
    TGTATGTGTG C

AT5G66400.1

Model type
Protein coding
Short Description
Dehydrin family protein
Curator Summary
Belongs to the dehydrin protein family, which contains highly conserved stretches of 7-17 residues that are repetitively scattered in their sequences, the K-, S-, Y- and lysine rich segments. ABA- and drought-induced glycine-rice dehydrin protein. The ABA-induced expression of RAB18 was reduced following ACC application, indicating that ethylene inhibits the ABA signaling pathway. RAB18 is also expressed in response to the formation of the phospholipid diacylglycerol pyrophosphate. COR47 and RAB18 double overexpressor plants are cold tolerant. Expressed in guard cells.
Computational Description
RESPONSIVE TO ABA 18 (RAB18); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: cold acclimation, response to water deprivation, response to 1-Aminocyclopropane-1-carboxylic Acid, response to abscisic acid stimulus, response to stress; LOCATED IN: cellular_component unknown; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Dehydrin (InterPro:IPR000167); BEST Arabidopsis thaliana protein match is: dehydrin xero 1 (TAIR:AT3G50980.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT5G66400.2

Model type
Protein coding
Short Description
Dehydrin family protein
Curator Summary
Belongs to the dehydrin protein family, which contains highly conserved stretches of 7-17 residues that are repetitively scattered in their sequences, the K-, S-, Y- and lysine rich segments. ABA- and drought-induced glycine-rice dehydrin protein. The ABA-induced expression of RAB18 was reduced following ACC application, indicating that ethylene inhibits the ABA signaling pathway. RAB18 is also expressed in response to the formation of the phospholipid diacylglycerol pyrophosphate. COR47 and RAB18 double overexpressor plants are cold tolerant. Expressed in guard cells.
Computational Description
RESPONSIVE TO ABA 18 (RAB18); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: cold acclimation, response to water deprivation, response to 1-Aminocyclopropane-1-carboxylic Acid, response to abscisic acid stimulus, response to stress; LOCATED IN: cellular_component unknown; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Dehydrin (InterPro:IPR000167); BEST Arabidopsis thaliana protein match is: dehydrin xero 1 (TAIR:AT3G50980.1); Has 55408 Blast hits to 21272 proteins in 1590 species: Archae - 46; Bacteria - 19188; Metazoa - 16568; Fungi - 3087; Plants - 7219; Viruses - 590; Other Eukaryotes - 8710 (source: NCBI BLink).
Link
InterPro Scan - TAIR