Home
Mutant Lines
54-0740-1

54-0740-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

5 prime edge [+] show sequence
1. Chromosome: 5; Position: 26465272 [Map]; Strand: w
  - AT5G66240.3 - [+] show detail - Transducin/WD40 repeat-like superfamily protein
    Distance: -900; Region: promoter
  - AT5G66240.1 - [+] show detail - Transducin/WD40 repeat-like superfamily protein
    Distance: -932; Region: promoter
  - AT5G66240.2 - [+] show detail - Transducin/WD40 repeat-like superfamily protein
    Distance: -932; Region: promoter
Flanking Genome Sequence: 54-0740-1 - 5-prime edge
```
GATGTGNNGG AGGTTGAAAG TCGGGGGACT TATAGNNTGT ACTANTANAA 
NNTGCACAAG ACAAGACTNA TTGACAATAA AACTGCGCCT CCCTTGGATT 
ATAATTAGAT TCTCGTGTAT AAATAAAACC CCCACATGCG ACAGCTGAAG 
AGGAAGGAAA CACTTAATCA TCAGAGCAGC TTGTAGATGA AGACCAAGAA 
CTCTGGCGCC GGATGTGTCC CCCGTGTAAA AACCAACTCC AGAGCCACTG 
GTAATCGGGA GACTAGTGAT CTGAATCTCC TGGACCGTTT TCGCGAAGCT 
GTTCTCCGCC TCATCATGAT CTCTGCTTCT CCNC
```

3 prime edge [+] show sequence

Chromosome: 5; Position: 26465207 [Map]; Strand: w
- AT5G66240.3 - [+] show detail - Transducin/WD40 repeat-like superfamily protein
  Distance: -965; Region: promoter
- AT5G66240.1 - [+] show detail - Transducin/WD40 repeat-like superfamily protein
  Distance: -997; Region: promoter
- AT5G66240.2 - [+] show detail - Transducin/WD40 repeat-like superfamily protein
  Distance: -997; Region: promoter

ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCCT 
TTATATCAAA GATATAAAAT CCTTTTAAGG CTGGTCAAGT TTAAGTTTTG 
GTGAATGGTA CATTTAATGT GTGTGTTTAT AACATGGTCG GGACATTTTA 
AGGGTATCTC CATCCATGAG AAACCCACAA AGTTTCTCAA AAAAAAAAAT 
NTTAATNTTA TNTTATAATT GGATTNTTNG ATNAAAAAAG TNTTTTNGTT 
AAAAAATNGA CCCANTANTA AAATNAAAAT TGNCGNNANG GGTTGNAAAN 
AGTNTCTNAA AGTTTNTNAN GNGAAAANCT TTATNCCCNC TCTCNCCTTN 
ATTTCNATNA TTTTAATTTT TTAAATGGGN AAAANCTNTT NTNAAANNCT 
TCCAANGGAA ANGGNCTNNT TCCCNTTCAA ATANCCCNTT TAAANCNTTT 
TTNTTNGTTA GGGGGCTNAT TTTNCCAAAA AATAAANCNG NCCCAAAACC 
TTTTCCANGT GGATTTNTNC NTCCTNGANC CTTNTNTAAA ANGGNCANGG 
GAAAANTTGN GTNTNTNAAA GGNTTTNCAA AANGGGGCAA ANTTAAAGGA 
CTTGCCCTAA GGATTTGTNG CATNCTTAAN GAATANANAN NGCGGGTCAT 
TGNCTTTACT GACCTCGTTN GATNATTTTC NCATGGCCAC ATGNNCAANA 
ATT

AT5G66240.1

Model type: Protein coding
Short Description: Transducin/WD40 repeat-like superfamily protein
Computational Description: Transducin/WD40 repeat-like superfamily protein; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat (InterPro:IPR001680), WD40 repeat, subgroup (InterPro:IPR019781), G-protein beta WD-40 repeat, region (InterPro:IPR020472); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT5G14530.1); Has 21938 Blast hits to 12469 proteins in 522 species: Archae - 46; Bacteria - 4852; Metazoa - 7701; Fungi - 4572; Plants - 2085; Viruses - 0; Other Eukaryotes - 2682 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT5G66240.2

Model type: Protein coding
Short Description: Transducin/WD40 repeat-like superfamily protein
Computational Description: Transducin/WD40 repeat-like superfamily protein; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat (InterPro:IPR001680), WD40 repeat, subgroup (InterPro:IPR019781), G-protein beta WD-40 repeat, region (InterPro:IPR020472); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT5G14530.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT5G66240.3

Model type: Protein coding
Short Description: Transducin/WD40 repeat-like superfamily protein
Computational Description: Transducin/WD40 repeat-like superfamily protein; FUNCTIONS IN: nucleotide binding; LOCATED IN: CUL4 RING ubiquitin ligase complex; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat-like-containing domain (InterPro:IPR011046), WD40 repeat 2 (InterPro:IPR019782), WD40-repeat-containing domain (InterPro:IPR017986), WD40 repeat (InterPro:IPR001680), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT5G14530.1).
Link: InterPro Scan - TAIR