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54-0743-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 26462319 [Map]; Strand: c
      • AT5G66230.2 - [+] show detail - Chalcone-flavanone isomerase family protein
        Distance: 0; Region: intron4 (CDS)
      • AT5G66230.1 - [+] show detail - Chalcone-flavanone isomerase family protein
        Distance: -266; Region: promoter
    Flanking Genome Sequence: 54-0743-1 - 5-prime edge 
    CATTAGATTT TGGAAGGCCC ACCTCTTTTA TTTGATCACT GATTTTTTCA 
    TTAACACAAA ATCATCTTTC ATAATCTTTA GAATCTTACT AAAAACATAA 
    AACTGTCTTA ATTAAGTCAC AACAATCTTT ATTTTAGCTG TCATCATAAG 
    TCACATAACA TCCTCCGCTG GCTTCATTTT CTAAAATTAT TCAAGATTGG 
    GCGAGTTGGA ATAGTTTCAA TTTTTTGTAG CTACGTTGAC GTTAGCCTTC 
    GTTGTACGGG TCTTTTTTGT TCATCAGCTT AGATAATCTC TCAGCGAGGC 
    TCTTCCTTGT CGCAGGGGAT ACACCATTCT TCCCTATCAT CGACTCAAGA 
    ACTGCCTCAC CCAACAACTT ATTCTTGATA ACCGCTTTTC CAGTTTTCGG 
    GACTCTCTCC TCTTTCGAAA ATGCAATCTG CATCACAAGT TGTCAAAAGA 
    TC

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 26462392 [Map]; Strand: c
      • AT5G66230.2 - [+] show detail - Chalcone-flavanone isomerase family protein
        Distance: 0; Region: intron4 (CDS)
      • AT5G66230.1 - [+] show detail - Chalcone-flavanone isomerase family protein
        Distance: -193; Region: promoter
    Flanking Genome Sequence: 54-0743-1 - 3-prime edge 
    ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCCC 
    GTANTAGTGT GGGCTTTTAA TCATGGCCTT TTTAGGGACG AAAAAGTCCA 
    TAATTCAGCG AAGGAAATAA CACAACGGCT AGTTNGATAA ACGGCTCCTT 
    CCATTTCTGT ACCCAACGGC TACTTTCTTT CAAAAACCCT TCACAGCGTT 
    TCAATACCCC TGTTTATTTA TACTTTACCC AAATTCCCAA ACGCCACAAT 
    CACTTGTCTG ATTCTCTCAT ATAATAGAGT TTTCTTTCTC TTCTCCTCTG 
    CTTAATTTCC CAGAAATTAC TCTTTCTGTG CTTATCGGAT TCAATAGATT 
    CTTAGTAAAT CGTAATGGAG ACACCATCAT CGACAAGAAG AGTCACGAGA 
    TC

AT5G66230.1

Model type
Protein coding
Short Description
Chalcone-flavanone isomerase family protein
Computational Description
Chalcone-flavanone isomerase family protein; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 8 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G51230.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT5G66230.2

Model type
Protein coding
Short Description
Chalcone-flavanone isomerase family protein
Computational Description
Chalcone-flavanone isomerase family protein; FUNCTIONS IN: chalcone isomerase activity, intramolecular lyase activity; INVOLVED IN: cellular amino acid derivative biosynthetic process, flavonoid biosynthetic process; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Chalcone isomerase, subgroup (InterPro:IPR003466), Chalcone isomerase, 3-layer sandwich (InterPro:IPR016088), Chalcone isomerase (InterPro:IPR016087); BEST Arabidopsis thaliana protein match is: Chalcone-flavanone isomerase family protein (TAIR:AT5G66220.1).
Link
InterPro Scan - TAIR