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54-0754-2

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 1580430 [Map]; Strand: c
      • AT3G05470.1 - [+] show detail - Actin-binding FH2 (formin homology 2) family protein
        Distance: 0; Region: intron3 (CDS)
    Flanking Genome Sequence: 54-0754-2 - 5-prime edge 
    CTTCTCCATG CTTGAGGTAT TACAGTGTTT ACTTTATATT CATTTATTGA 
    TTTCTTGCAC TTCAAGTTAC GGTGATTAAC ACTTAAAAGT ACTTTACTAG 
    GAAGCTTGCA AGGAGCNTTA AATCAAGCAG GTTATTCTTG AAGCTTCTAG 
    AAGCTGTCCT AAAGACTGGA AACAGGATGA ATGTAGGAAC CATACGCGGT 
    GGTGCAAAAG CATTCAAGCT CGATGCTCTG CTTAAACTCT CTGATGTTAA 
    AGGCACAGAT GGAAAGACTA CTCTGCTTCA TTTTGTTGTA CAAGAGATC

  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 1580546 [Map]; Strand: c
      • AT3G05470.1 - [+] show detail - Actin-binding FH2 (formin homology 2) family protein
        Distance: 0; Region: exon3 (CDS)
    Flanking Genome Sequence: 54-0754-2 - 3-prime edge 
    TGGAGAAGGA GTTTCTGAGA TGAAGCACTT CATCTTCAAA CGTTTCTCTA 
    TAAAGCATTG CTTCAGCTCT CTGAAACGCA AATGGAACTC CAACAAGAGC 
    TCTGAGAAAC TTCTCAGCTG AGCCAAGCTC ATCCACGGCT CCTTTGTAGC 
    TACGCAGCCT TCAACTCTTC TTCTTTAGTC GGCACCATCT TCACCAACGC 
    TTCTAGTTGC TGTAAACACA AGCCTTCCCC TACAGATAAA CATTTTAACA 
    TCAGATCAGC TCCGCAATGG ATTGATTTTG GTTGATATTA GTTTACCTTT 
    CCCCAAGGCA GAGCAGATTT GGTCCGCGGT TGCGTTGAGA GCTTTCAAGA 
    GAATGGTAAA ATTCTGAAGT CTTTTAGGTT CAAGAAGGTG TTTCCCTGGT 
    GATGGAGTTT TGCTCTTCCC TTCCTCATTC TTCGTTGAGC TTTGCATCGT 
    ATATCCAAAC AGTGACTCAA TCATCTCTTC GTCTAATCTG AATAACCACA 
    AGACAACACA TAATCACACA TTCATGAAAA ACATTTTGTT GATTGTGGCT 
    AGTTAAAAAC TTACTCGAAA GAGCTTGTTC TGAGCTTATC CCAATTCCCA 
    AACCATAGTC CGGTCTGGTG TAGCCCTGAC TTTATCCAAG TGAAGTGGCT 
    TCAGTTTANG CAATGGAGCT CCGTCTTTGC CTAATGGTCT ACGCTCAGAA 
    AAATCAAGAG ACAATGN

AT3G05470.1

Model type
Protein coding
Short Description
Actin-binding FH2 (formin homology 2) family protein
Computational Description
Actin-binding FH2 (formin homology 2) family protein; FUNCTIONS IN: actin binding; INVOLVED IN: cellular component organization, actin cytoskeleton organization; LOCATED IN: endomembrane system; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Actin-binding FH2/DRF autoregulatory (InterPro:IPR003104), Actin-binding FH2 (InterPro:IPR015425); BEST Arabidopsis thaliana protein match is: formin homolog 6 (TAIR:AT5G67470.1); Has 5495 Blast hits to 4819 proteins in 357 species: Archae - 2; Bacteria - 168; Metazoa - 2550; Fungi - 658; Plants - 1088; Viruses - 235; Other Eukaryotes - 794 (source: NCBI BLink).
Link
InterPro Scan - TAIR