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54-0770-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 26501964 [Map]; Strand: w
      • AT5G66330.1 - [+] show detail - Leucine-rich repeat (LRR) family protein
        Distance: -9; Region: promoter
      • AT5G66340.1 - [+] show detail - unknown protein; Has 1807 Blast hits to 1807 proteins in 277 species: Archae ...
        Distance: -538; Region: promoter
    Flanking Genome Sequence: 54-0770-1 - 5-prime edge 
    GATAGATCTA CTGAAAGTTG CTCTGAAACT TGAAAGACAG AGGAATTTAT 
    ATATAGAGAG ATTGAGATAT TAAAATAGAT AGTGTAAATT TATATCATGT 
    GTGTCATTGT CCATCAGACA TATGCNGTGA AGACAACAAC ATCTGTACAG 
    TGAGGTGTGG TTGGCCCTAT CCCCATCCAC CATAACTCAG AGGTTATGAG 
    TTTGAGATTC TGTTGAGATT CCAAAGCAGA ACAACTCTTG ATTTAGGATT 
    ATTTGACATA TTACCAATTC ACATGTCATA AATTGACTAA TAAACTTTAC 
    AATTTATTTC ATTTTCTCCC ATATGTGACG TACCCATTTG ACCAGAAGTT 
    GTCAAAATCT AAACTAGTCT TGGTTGATGA CATAGATAGA AGAAGTAATT 
    ATAGCCTTAC AGGAAGCAAG GTTGATGGGT TAATGAATGT GCAGCTGTTG 
    CAAGCAAAGG TTCCAAATCA TTGGCTCTAA CTAACTTTAA ATCTATGGAA 
    GACGACGAAA ATGTTCATAT ATGATAGGAT CACTCATTAG CGTTAGGTGT 
    CTAAAACTCT AAACCTAAGC CATGTGGGAC ACTAAATCAT CCTAACGGGT 
    CACTAAGACT ATGCAGAGAT TGGTAAAACA AAAGGTACTA ACATAATCTA 
    TTGGCACCAT CTGAATTTGT TGTCGTCCTT GCTTTTCGTC GGTATGT

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 26501848 [Map]; Strand: w
      • AT5G66330.1 - [+] show detail - Leucine-rich repeat (LRR) family protein
        Distance: 0; Region: exon1 (5UTR)
      • AT5G66340.1 - [+] show detail - unknown protein; Has 1807 Blast hits to 1807 proteins in 277 species: Archae ...
        Distance: -654; Region: promoter
    Flanking Genome Sequence: 54-0770-1 - 3-prime edge 
    GATCTATCAC ACGCCTTGAC CCTCTCATCC AACGGTCATT ATTCACTCCA 
    AACCCACTCT GCTTCTTCTT CTTCCAAACA TCTCTCAGCA GAGCTAACCA 
    TCTCTCTTTT GTAATGGCTT CACTTATTTC CCTTGTTCTT CTTCTTTTGC 
    TCACTTTATC TTCAGCAGAG TCCAAGACTT TCTGGGGTGA CGTGGCAGCT 
    CTCAAAGACT TCAAGAACTC AGTGGATGCC AAATCCATGA GTCCAGGCTC 
    TTGCCTGAGT TCTTGGGATT TCTCCGTCGA TCCCTGCGAC AATATATTCA 
    GCGACACATT CACTTGTGGG TTCCGCTGCG ACTCCGTCGT TACCGGATCG 
    GGTCGGGTCA CGGAGCTCAG TCTGGACCAA GCCGGTTACT CAGGCTCCCT 
    CTCCTCCGTC TCTTTCAACC TTCCTTATCT CCAGACCCTC GATCTCTCCG 
    GCAACTACTT CTCCGGTCCA CTTCCCGACT CGCTCTCCAA TCTCACCCGT 
    CTCACCCGCC TCACTGTGTC CGGAAACTCC TTTTCCGGAT C

AT5G66330.1

Model type
Protein coding
Short Description
Leucine-rich repeat (LRR) family protein
Computational Description
Leucine-rich repeat (LRR) family protein; INVOLVED IN: signal transduction; LOCATED IN: endomembrane system; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat (LRR) family protein (TAIR:AT2G15320.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT5G66340.1

Model type
Protein coding
Computational Description
unknown protein; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR