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54-0785-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 20961568 [Map]; Strand: w
      • AT5G51600.1 - [+] show detail - Microtubule associated protein (MAP65/ASE1) family protein
        Distance: 0; Region: intron11 (CDS)
    Flanking Genome Sequence: 54-0785-1 - 5-prime edge 
    CCTGCAATGT CAAGCCCTCT TCTTCCTGCA GGAATAAGAT TCATTTGCCA 
    ATGCAATTAG GAAATCTACT CATACTATGA TGATAACCAA TGATTTACAT 
    TTGATTAAGA GACTTAGTTA CCATTTGATA AAGCTCCATC ATTATGTCGG 
    TGATCTGCTT TCTTGTTAGG CTTAGGAGTC TGATGCATTG CTGCTCCTAA 
    GGAAAGTCTT CTGTTAGATG CACCACCGGT CGACATTCTT GGAGCCTTTT 
    TACCACCAAG GGGTTTAGAT GGGCTGGGTT TGGACCCGTA AAGTGCCTCT 
    TGTTCTGCTA TGAGCTGTCC TTGAAGCTAC CAGNCCNGGC NGTAGANCAC 
    GCTGCCCNCC TATAGAGTCA AATATGACTT GATGNTCATG TTTATGATTG 
    AGTATAAGAA CATGAACCGC ATCCCGATCT TATAAGCCTA AGTAGTGTTT 
    CCTTGTTAGA ACATACAAAG CCAAAGACTC ATACGGACTT TGGCTAAACC 
    ATGAAAGCT

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 20961452 [Map]; Strand: w
      • AT5G51600.1 - [+] show detail - Microtubule associated protein (MAP65/ASE1) family protein
        Distance: 0; Region: exon12 (CDS)
    Flanking Genome Sequence: 54-0785-1 - 3-prime edge 
    ATTGCAGGAC TACCCTCAAG GANACAATCA ATGAATNNTT CTGAAATGTT 
    GCAATCNCCA TTANTTCGCA AACCGTTTTC CCCCATATNT ACCACGGTGG 
    TTGCATCAGA NGCCNNCATA NCANCANCNN CTNANTCAAN TGNGNNACGA 
    NNNCCAGCCC ACAGNAAAGA GATNATGGCT GACAATGATG GGGNNGTCCC 
    ACGNGAGAGG NGCATCCGGG GGTAAAAGGT GGGTGCCTTC ACNTNTGTNC 
    TCACACNGGG AGANAATTTN NNANANNGGG GGGTGTATTA NCGGGGNNGT 
    TNACNAACCN GNNCCNGANA GGGGACNGNA AACCCCCCNC CCCCCCCNCN 
    CCCTCTNCTC TAATTTTATN CCTNNNTNNG AGNGCTNNNN NNNTNNNTAT 
    ATTNNNNTNT NNNNNNNGGA NNNNGNNNNN GNTNNNNATN NTNTNNNNNN 
    ANNNNNNAAN NNANNNANNG GGNTNTGAAN ANGNGTNTNN NNNGANANAN 
    NNNNNNGNNN NGNNNGNNNN NNAAANANNN NTNNNNNTAA TNTNGNNNNG 
    GCGNCNNNNN GNNNNNCGNN NNNNNNNANN GGGNNNNTNN NNNAAAAAAN 
    NAANNTTNGT ANNNGNGNNN CCNNNNGGNG GGNGGNNNNN GGGNGNGCCN 
    NNCNNNNNAN TGGNGGGNNN GGGNNNNNNN NNANGNNGNC GGGNGGGNAA 
    ANANNGNNNN NNNGGNNNNN GNGGNNGNNN NNNNGANANA AAAAAAAAAA 
    A

AT5G51600.1

Model type
Protein coding
Short Description
Microtubule associated protein (MAP65/ASE1) family protein
Curator Summary
Mutant has defective roots. Essential for giant cell ontogenesis. Role in organizing the mitotic microtubule array during both early and late mitosis in all plant organs.
Computational Description
PLEIADE (PLE); CONTAINS InterPro DOMAIN/s: Microtubule-associated protein, MAP65/ASE1-type (InterPro:IPR007145); BEST Arabidopsis thaliana protein match is: microtubule-associated protein 65-4 (TAIR:AT3G60840.1); Has 4514 Blast hits to 3795 proteins in 427 species: Archae - 120; Bacteria - 292; Metazoa - 2464; Fungi - 290; Plants - 515; Viruses - 1; Other Eukaryotes - 832 (source: NCBI BLink).
Link
InterPro Scan - TAIR