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Mutant Lines
54-0822-1

54-0822-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

5 prime edge [+] show sequence

Chromosome: 5; Position: 26459157 [Map]; Strand: w
- AT5G66210.4 - [+] show detail - calcium-dependent protein kinase 28
  Distance: 0; Region: exon1 (CDS)
- AT5G66210.2 - [+] show detail - calcium-dependent protein kinase 28
  Distance: 0; Region: exon2 (CDS)
- AT5G66210.1 - [+] show detail - calcium-dependent protein kinase 28
  Distance: 0; Region: exon1 (CDS)
- AT5G66210.3 - [+] show detail - calcium-dependent protein kinase 28
  Distance: 0; Region: exon1 (CDS)

ATACCAACAA CTAGTAAAAG GGGAAAAGAA ACCCTAGTAA GGGCTGGAAA 
AAGTGTACCT TAGACTTATC GAGTCTTTTG ACGGCGACGC GATCTCCATT 
GGGTCTGTGG ATGGCGACNG TAGGTGTAGC CGAATTGACC ATGGCCGAGC 
AACTTGCCGA TGGTGTAGTG ATCGTGGAAG TCTTTGGAGT AGCCAAAATC 
GGTACGCTTG CCGCAGGGGA TGGAGCCGGT TCGGCGTTTG GTAGAGGCCT 
TGGTATCGAT GGGAGTAGGA GCAGCCTTGG ATTTGGTCTG ACTGCTTCGT 
CTACTGCTGC TAGCACCAGT GACTCTAATG GCGGAGAAAC AGACACCCAT 
GGCTCTGATG AATCGAGAAA GTTAGAAAAG AAAGGGATTA ATAAAAGAAA 
GAGATGAAAG AAGAAAGAAG AAGAAGAGAG GAAGGCAGAG AAGATTATTA 
GAGTTGAGTT GGTCAAACCC AAAGCGCCGA GTGAACCCCT CCAAGGAGGA 
TC

3 prime edge [+] show sequence

Chromosome: 5; Position: 26459093 [Map]; Strand: w
- AT5G66210.4 - [+] show detail - calcium-dependent protein kinase 28
  Distance: 0; Region: intron1 (CDS)
- AT5G66210.2 - [+] show detail - calcium-dependent protein kinase 28
  Distance: 0; Region: intron2 (CDS)
- AT5G66210.1 - [+] show detail - calcium-dependent protein kinase 28
  Distance: 0; Region: intron1 (CDS)
- AT5G66210.3 - [+] show detail - calcium-dependent protein kinase 28
  Distance: 0; Region: intron1 (CDS)

ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCCG 
TGGTTGGTAT CTTCCTCCAC TACCATCTAC TAGATTCACA TCAGAAAAAT 
AGTTGCGGAT CTTTTTAATT TAGTTTAACA CTGATTCCCA ATTTGTACTT 
TGTTTACTTA GTTAGTGCTC TTTCTCTGTT CCTTCATTTG CAACATTGTT 
CTGTGGTTTT ACTGCATCCT CTGCTCTGCT TTGAGGTCAC TCATCACCAT 
GTTTTGCTCA CAGATGGTTC TTCCTATTGC TGTTGAGGAT GTCAAGCGTG 
AGGTTCAGAT TCTTATTGCT CTCTCTGGCC ACGAGAATGT TGTTCAGTTT 
CACAATGCCT TTGAGGATGA CGATTACTCT TGAGAATGTT TTGCTCACAG 
GATATATTCA ATTGTAAATG GCTTCATGTC CGGGAAATCT ACATGGATCA 
GCAATGAGTA TGATGGTCAA TATGGAGAAA AAGAAAGAGT AATTACCAAT 
TTTTTTTCAA TTCAAAAATG TAGATGTCCG CAGCGTTATT ATAAAATGAA 
AGTACATTTT GATAAAACGA CAAATTACGA TCCGTCGTAT TTATAGGCGA 
AAGCAATAAA CAAATTATTC TAATTCGGAA ATCTTTATTT CGACGTGTCT 
ACATTCACGT CCAAATGGGG GCTTAGATGA GAAACTTCAC GATCGCCTCG 
AGGCCGACCA ACCGCAAGCG TTGTCAGTGT TGCAAAGCGC TCTGTGTGGG 
CCTACTTTAA TTGCTTCCAG TGT

AT5G66210.1

Model type: Protein coding
Short Description: calcium-dependent protein kinase 28
Curator Summary: member of Calcium Dependent Protein Kinase
Computational Description: calcium-dependent protein kinase 28 (CPK28); FUNCTIONS IN: protein serine/threonine kinase activity, calmodulin-dependent protein kinase activity, protein kinase activity, calcium ion binding, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), EF-Hand 1, calcium-binding site (InterPro:IPR018247), Serine/threonine-protein kinase domain (InterPro:IPR002290), Calcium-binding EF-hand (InterPro:IPR002048), EF-hand-like domain (InterPro:IPR011992), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), EF-HAND 2 (InterPro:IPR018249), Calcium-dependent protein kinase (InterPro:IPR020642), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636); BEST Arabidopsis thaliana protein match is: calcium-dependent protein kinase 16 (TAIR:AT2G17890.1); Has 124563 Blast hits to 121753 proteins in 3731 species: Archae - 157; Bacteria - 14240; Metazoa - 45960; Fungi - 14836; Plants - 27830; Viruses - 455; Other Eukaryotes - 21085 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT5G66210.2

Model type: Protein coding
Short Description: calcium-dependent protein kinase 28
Curator Summary: member of Calcium Dependent Protein Kinase
Computational Description: calcium-dependent protein kinase 28 (CPK28); FUNCTIONS IN: protein serine/threonine kinase activity, calmodulin-dependent protein kinase activity, protein kinase activity, ATP binding, calcium ion binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), EF-Hand 1, calcium-binding site (InterPro:IPR018247), Serine/threonine-protein kinase domain (InterPro:IPR002290), EF-hand-like domain (InterPro:IPR011992), Calcium-binding EF-hand (InterPro:IPR002048), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), EF-HAND 2 (InterPro:IPR018249), Calcium-dependent protein kinase (InterPro:IPR020642), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: calcium-dependent protein kinase 16 (TAIR:AT2G17890.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT5G66210.3

Model type: Protein coding
Short Description: calcium-dependent protein kinase 28
Curator Summary: member of Calcium Dependent Protein Kinase
Computational Description: calcium-dependent protein kinase 28 (CPK28); FUNCTIONS IN: protein serine/threonine kinase activity, calmodulin-dependent protein kinase activity, protein kinase activity, ATP binding, calcium ion binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), EF-Hand 1, calcium-binding site (InterPro:IPR018247), Serine/threonine-protein kinase domain (InterPro:IPR002290), Calcium-binding EF-hand (InterPro:IPR002048), EF-hand-like domain (InterPro:IPR011992), EF-hand (InterPro:IPR018248), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), EF-HAND 2 (InterPro:IPR018249), Calcium-dependent protein kinase (InterPro:IPR020642), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636); BEST Arabidopsis thaliana protein match is: calcium-dependent protein kinase 16 (TAIR:AT2G17890.1); Has 122907 Blast hits to 120110 proteins in 3700 species: Archae - 157; Bacteria - 14345; Metazoa - 44968; Fungi - 14295; Plants - 27583; Viruses - 455; Other Eukaryotes - 21104 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT5G66210.4

Model type: Protein coding
Short Description: calcium-dependent protein kinase 28
Curator Summary: member of Calcium Dependent Protein Kinase
Computational Description: calcium-dependent protein kinase 28 (CPK28); FUNCTIONS IN: protein serine/threonine kinase activity, calmodulin-dependent protein kinase activity, protein kinase activity, calcium ion binding, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), EF-Hand 1, calcium-binding site (InterPro:IPR018247), Serine/threonine-protein kinase domain (InterPro:IPR002290), EF-hand-like domain (InterPro:IPR011992), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), EF-HAND 2 (InterPro:IPR018249), Calcium-dependent protein kinase (InterPro:IPR020642), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636); BEST Arabidopsis thaliana protein match is: calcium-dependent protein kinase 16 (TAIR:AT2G17890.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link: InterPro Scan - TAIR