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Mutant Lines
54-0825-1

54-0825-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

5 prime edge [+] show sequence

Chromosome: 5; Position: 26321301 [Map]; Strand: c
- AT5G65780.1 - [+] show detail - branched-chain amino acid aminotransferase 5 / branched-chain amino acid tran...
  Distance: 2489; Region: intergenic
- AT5G65790.1 - [+] show detail - myb domain protein 68
  Distance: -1647; Region: intergenic

TTCGTAAACA AAGCGCAAGT GATTGAACTA ACAGTTCTTG GATAAATACA 
AAGAAACTTC TTCATACTAT ATATATCAAA GTTTTTTTCC TTTCAAATCC 
ATCAATTAAA TTGTCTAAAG AAATATCACT AATCAGAAGA TCACATTTGG 
TGGATGGTGA ATCACTTGCT ATTTAATATA CATTTGTCTT TTGAAAAGGA 
AAGGAGTTAA TGATATGTAC CAAAAGAGAT GAAAAGAAAG GTAGAGATAT 
TGAAATTTGT GAGTGTAAAT TCCGTTACGG TTGGTGAACA AAATTTTGCC 
AACCCTCGGA GAAAATTTAC CACTAACAAA TTTATGGATA TTAAAACTTT 
TCTGGATCAG GTACGATTTT ATCTATTATT AATCTCCTTA AGAGAAAAAA 
TTGTAATAAA ATATAACGGA TTATAACTTA TAAAATGACA AAGTTTCAAA 
CTCACGGTGA CAATACTGAA TTGATAGATG GGTTTGTTTA ATTCATTTAT 
AAATGTAGCC ACTTAATAAT CATGCAGTAT TAAAATTGAA CCTAATGACG 
CCTGTCCCAT GGACCCAAAA TCAAATTTTA ATCAAAGATT TGATAGGGAT 
GTTACAAATC TAACTATTAT AATTTAATTC AATAAATTTA CTACTAACAC 
TTATTTTNCA CGGCAGCTGA GATTAAGGAA CAAGAAAACC CACTATACCT 
CTTAT

3 prime edge [+] show sequence
1. Chromosome: 5; Position: 26321417 [Map]; Strand: c
  - AT5G65780.1 - [+] show detail - branched-chain amino acid aminotransferase 5 / branched-chain amino acid tran...
    Distance: 2605; Region: intergenic
  - AT5G65790.1 - [+] show detail - myb domain protein 68
    Distance: -1531; Region: intergenic
Flanking Genome Sequence: 54-0825-1 - 3-prime edge
```
TTTACGAATG ATTAATGACG TTAACTATTC AAATACGATG CTACTCTGTT 
GTTGAATT
```

AT5G65780.1

Model type: Protein coding
Short Description: branched-chain amino acid aminotransferase 5 / branched-chain amino acid transaminase 5 (BCAT5)
Curator Summary: encodes a chloroplast branched-chain amino acid aminotransferase, can complement the yeast leu/iso-leu/val auxotrophy mutant
Computational Description: ATBCAT-5; FUNCTIONS IN: branched-chain-amino-acid transaminase activity, catalytic activity; INVOLVED IN: branched chain family amino acid metabolic process, metabolic process; LOCATED IN: mitochondrion, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aminotransferase, class IV (InterPro:IPR001544), Aminotransferase, class IV, conserved site (InterPro:IPR018300), Branched-chain amino acid aminotransferase II (InterPro:IPR005786); BEST Arabidopsis thaliana protein match is: branched-chain aminotransferase 3 (TAIR:AT3G49680.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT5G65790.1

Model type: Protein coding
Short Description: myb domain protein 68
Curator Summary: Encodes a putative MYB transcription factor.
Computational Description: myb domain protein 68 (MYB68); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 84 (TAIR:AT3G49690.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link: InterPro Scan - TAIR