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54-0901-4

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 26462608 [Map]; Strand: w
      • AT5G66230.2 - [+] show detail - Chalcone-flavanone isomerase family protein
        Distance: 0; Region: intron4 (CDS)
      • AT5G66230.1 - [+] show detail - Chalcone-flavanone isomerase family protein
        Distance: 0; Region: exon1 (5UTR)
    Flanking Genome Sequence: 54-0901-4 - 5-prime edge 
    GNTTCAATAC CCCTGTTNAT TTATACTTTA CCCAAATTCC CAAACGCCAC 
    AATCACTTGT CTGATTCTCT CATATAATAG AGTTTTCTTT CTCTTNTCCT 
    CTGCTTAATT TCCCAGAAAT TACATCTTTC TGNGCTTATC GGATTCAATA 
    GATTCTTAGT AAATCGTAAT GGAGACACCA TCATCGACAA GAAGAGTCAC 
    AGAGATCTCA GACCCGCTCT GCTATCAATA ATCTCTTATC CTCAAGTAAG 
    TCTCCATAGN CCNATTCCCT GATTTTGTTT ATTGAGTCGG ACTATNGTTT 
    CTGGATCTGA TCGTTTATAA TTNATNTTCC TACAGAGAAA GCGGATGATT 
    GGTCAGATAA ATGTCAATCG AAGTCGGTAC AAAGAAACGG TGCAAAAGAC 
    AGGTCTGCGT TGTTTGACAT AACCAACGAC TCACCGATCG TAGGTCTGGC 
    GATGCAGACA CCGTCCTCAG GAGTTGTTGG GAAGAGGAAC ATGAGCAGAA 
    TCAATAACAC TCCTGGATCT GGTGAGGCTC TCTTGAGAGG CCAAGTCAAG 
    ACTCTCTTGC AGAAGGTTGA GGAAGAAGCA GATCTCACCA AGATTTCGTT 
    GGAATCTCGT CCTTTCATCC ATCTCGTTAC TTCTCCCATG GGTCTTCTCG 
    CCCCAACTNC GGCCAACACC CCCCAAGTTC TTGGTTTCTC AGACGAAGTG 
    CAGGTTGG

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 26462492 [Map]; Strand: w
      • AT5G66230.2 - [+] show detail - Chalcone-flavanone isomerase family protein
        Distance: 0; Region: intron4 (CDS)
      • AT5G66230.1 - [+] show detail - Chalcone-flavanone isomerase family protein
        Distance: -93; Region: promoter
    Flanking Genome Sequence: 54-0901-4 - 3-prime edge 
    ATTGAAACGC TGTGAAGGGT TTTTGAAAGA AAGTAGCCGT TGGGTACAGA 
    AATGGAAGGA GCCGTTTATC AAACTAGCCG TTGTGTTATT TCCTTCGCTG 
    AATTATGGAC TTTTTCGTCC CTAAAAAGGC CATGATTAAA AGCCCACACT 
    ATTACATTAG ATTTTGGAAG GCCCACCTCT TTTATTTGAT CACTGATTTT 
    TTCATTAACA CAAAATCATC TTTCATAATC TTTAGAATCT TACTAAAAAC 
    ATAAAACTGT CTTAATTAAG TCACAACAAT CTTTATTTTA GCTGTCATCA 
    TAAGTCACAT AACATCCTCC GCTGGCTTCA TTTTCTAAAA TTATTCAAGA 
    TTGGGCGAGT TGGAATAGTT TCAATTTTTT GTAGCTACGT TGACGTTAGC 
    TTCGTTGTAC GGGTCTTTTT TGTTCATCAG CTTAGATAAT CTCTCAGCGA 
    GGCTCTTCCT TGTCGCAGGG GATACACCAT TCTTCCCTAT CATCGACTCA 
    AGAACTGCCT CACCCAACAA CTTATTCTTG ATAACCGCTT TTCCAGTTTT 
    CGGGACTCTC TCCTCTTTCG AAAATGCAAT CTGCATCACA AAGGTGGTCA 
    AAAGATCTCG ATCATTCATT CGACCAATAT TATTCGAAAT GATAATCCGA 
    AAAATAAAGT TGACTCACTG TGAGAGAGCC TTTAGGACAG ATAGCGAAGA 
    TGATTGAAGA GCCNGGAGGG AAT

AT5G66230.1

Model type
Protein coding
Short Description
Chalcone-flavanone isomerase family protein
Computational Description
Chalcone-flavanone isomerase family protein; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 8 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G51230.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT5G66230.2

Model type
Protein coding
Short Description
Chalcone-flavanone isomerase family protein
Computational Description
Chalcone-flavanone isomerase family protein; FUNCTIONS IN: chalcone isomerase activity, intramolecular lyase activity; INVOLVED IN: cellular amino acid derivative biosynthetic process, flavonoid biosynthetic process; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Chalcone isomerase, subgroup (InterPro:IPR003466), Chalcone isomerase, 3-layer sandwich (InterPro:IPR016088), Chalcone isomerase (InterPro:IPR016087); BEST Arabidopsis thaliana protein match is: Chalcone-flavanone isomerase family protein (TAIR:AT5G66220.1).
Link
InterPro Scan - TAIR