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54-0914-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 21863704 [Map]; Strand: w
      • AT3G59130.1 - [+] show detail - Cysteine/Histidine-rich C1 domain family protein
        Distance: -897; Region: promoter
      • AT3G59140.1 - [+] show detail - multidrug resistance-associated protein 14
        Distance: 0; Region: intron10 (CDS)
    Flanking Genome Sequence: 54-0914-1 - 5-prime edge
    GGGAAAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
    CCCATCCTAC TTTCATACTN ACCGTCGCTG ATGGAGAGAA CCATTGTACA
    GTCCATGACT GGTAGGGATA CGGTGAGCAA CTGTAATGAC AGTGCANTCT
    GCAAATTCTC TGCCTGATTG TTNNCTGAAG NATCAAATCT GTTGCATTAT
    CTATCGATGC CGTGGCTTCG GCCAGGACTA ATACTCTGCT TCTTCTCAAA
    ACTGCTCTGC CTAAACAGAA CAATTGTCTC TGTCCCATGC TCCAATTTGA
    TCCATCCTCC ACAACTATAA ACAAAAATAT AACACAACTC AAAGCCATCT
    GACTTACTAG AAATCTCTCT CTTATAAGAA ACTAAGATTT GTTACCTAAT
    GAATCTAAGC CGTTCTCTTT TTCTTGAACC ACTTCTTTTA GTTGACACTT
    GCCAAGAACC TGCATTTTTA GAAAATAGCT TTTTGTTTAG TCTCAACTCC
    TTTATAAGAT TCATGGTTTT CTCAAATGGG TTTTAAGATT TAGACGTACC
    TCCCAAATCT CAGCATCTGA ATGCTGACAC AAAGGATC
  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 21863643 [Map]; Strand: w
      • AT3G59130.1 - [+] show detail - Cysteine/Histidine-rich C1 domain family protein
        Distance: -836; Region: promoter
      • AT3G59140.1 - [+] show detail - multidrug resistance-associated protein 14
        Distance: 0; Region: intron10 (CDS)
    Flanking Genome Sequence: 54-0914-1 - 3-prime edge
    GTTGCATCAT CTTGATCTGT TTTCTCCTCT GAATCTGTTT TTGATGGTTT 
    TGGTTTGCAT TTTAGGACGA ATTGTGGAAT ATGATGAGCC AATGAAGTTG
    ATGAAGGATG AGAACTCTTT GTTCGGAAAG CT

AT3G59130.1

Model type
Protein coding
Short Description
Cysteine/Histidine-rich C1 domain family protein
Computational Description
Cysteine/Histidine-rich C1 domain family protein; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: DC1 (InterPro:IPR004146), C1-like (InterPro:IPR011424); BEST Arabidopsis thaliana protein match is: Cysteine/Histidine-rich C1 domain family protein (TAIR:AT3G59120.1); Has 1035 Blast hits to 542 proteins in 22 species: Archae - 0; Bacteria - 0; Metazoa - 4; Fungi - 2; Plants - 1023; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT3G59140.1

Model type
Protein coding
Short Description
multidrug resistance-associated protein 14
Curator Summary
member of MRP subfamily
Computational Description
multidrug resistance-associated protein 14 (MRP14); FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances; INVOLVED IN: transport, transmembrane transport; LOCATED IN: plasma membrane; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC transporter integral membrane type 1 (InterPro:IPR017940), ABC transporter, transmembrane domain, type 1 (InterPro:IPR011527), ABC transporter, transmembrane domain (InterPro:IPR001140), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: multidrug resistance-associated protein 6 (TAIR:AT3G21250.2); Has 673798 Blast hits to 360971 proteins in 4075 species: Archae - 12279; Bacteria - 544381; Metazoa - 13093; Fungi - 8967; Plants - 6941; Viruses - 21; Other Eukaryotes - 88116 (source: NCBI BLink).
Link
InterPro Scan - TAIR