1. Home
  2. Mutant Lines
  3. 54-0919-1

54-0919-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 176221 [Map]; Strand: c
      • AT2G01410.1 - [+] show detail - NHL domain-containing protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 54-0919-1 - 5-prime edge 
    CCTGGGACTG CTGATTCCCT CCTCCGCCGA TAACCGCCAC GTTATCAACT 
    TCCGATCGCC GGGACTCTAC CCGGAGGGAC TAACCTGGGA TC

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 176342 [Map]; Strand: c
      • AT2G01410.1 - [+] show detail - NHL domain-containing protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 54-0919-1 - 3-prime edge 
    AGGAACNAGA CGGCGAAGAG AATTGGGAAG ACGAAGAAGG ATCTGTATCG 
    AGTGGAAGAC GACGACGACA TGTTCGCTTT CATCTGTGCT TCTCCNCTA

AT2G01410.1

Model type
Protein coding
Short Description
NHL domain-containing protein
Computational Description
NHL domain-containing protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Six-bladed beta-propeller, TolB-like (InterPro:IPR011042); BEST Arabidopsis thaliana protein match is: Calcium-dependent phosphotriesterase superfamily protein (TAIR:AT2G16760.1); Has 137 Blast hits to 137 proteins in 39 species: Archae - 0; Bacteria - 57; Metazoa - 0; Fungi - 0; Plants - 76; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink).
Link
InterPro Scan - TAIR