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54-0938-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 1972873 [Map]; Strand: c
      • AT3G06437.1 - [+] show detail - pseudogene, hypothetical protein
        Distance: -418; Region: promoter
      • AT3G06440.1 - [+] show detail - Galactosyltransferase family protein
        Distance: 0; Region: exon8 (3UTR)
    Flanking Genome Sequence: 54-0938-1 - 5-prime edge 
    AAAAAGAGAA CCAANCTATT TGCTGCGAAT AAATCTCTCG AGCATGTACG 
    TATGTAACTT TTCTGGTTCT GTTTCACACT TCAGGAAGAA GTTCTCCCAG 
    TTAAAGACAC ACTGGCTCGA GTATGTCAGA GTATATTGGC TATTATCTGT 
    CTTTGTAGAT TCTCTCAATC AGCATATCTA CAAACATATT CGAACCATAG 
    TTTATAGGCC AGGAGCGTGT CAAAGGTGCC ATTAGTGTCT TATTCATTGT 
    CCTCGTAAAC GTTGTTGCTT TTGTTGTATC GGGGCACACT TATCCGGATT 
    TATCGATTAT GCAATTGCCC TACTACATCA CATTATTATT TAAATTTGTC 
    TTCAAG

AT3G06437.1

Model type
Pseudogene
Computational Description
pseudogene, hypothetical protein
Link
InterPro Scan - TAIR

AT3G06440.1

Model type
Protein coding
Short Description
Galactosyltransferase family protein
Computational Description
Galactosyltransferase family protein; FUNCTIONS IN: transferase activity, transferring hexosyl groups, transferase activity, transferring glycosyl groups; INVOLVED IN: protein amino acid glycosylation; LOCATED IN: membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Galectin, carbohydrate recognition domain (InterPro:IPR001079), Glycosyl transferase, family 31 (InterPro:IPR002659), Concanavalin A-like lectin/glucanase (InterPro:IPR008985), Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320); BEST Arabidopsis thaliana protein match is: galactosyltransferase1 (TAIR:AT1G26810.1); Has 2377 Blast hits to 2343 proteins in 110 species: Archae - 0; Bacteria - 0; Metazoa - 1703; Fungi - 5; Plants - 611; Viruses - 0; Other Eukaryotes - 58 (source: NCBI BLink).
Link
InterPro Scan - TAIR