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54-1003-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 30137238 [Map]; Strand: c
      • AT1G80110.1 - [+] show detail - phloem protein 2-B11
        Distance: 282; Region: intergenic
      • AT1G80120.1 - [+] show detail - Protein of unknown function (DUF567)
        Distance: -1863; Region: intergenic
    Flanking Genome Sequence: 54-1003-1 - 3-prime edge 
    ATTCTCATAG ATAGTGCTGG AGGTTAGAGA CCGACTTTAC CAACGTGTTC 
    ATTACGTTTT CTACTCGGTT TGCCATTTTT CTTTACTCAA TCAGGTCGAG 
    ATCGAAACGT TGGACTCATA GTTCCAAAAT TAGCTAAAAT TGGATACTTA 
    TTTATTAAAA CAATCCTGTA CTTTTGACCT AATTAGATAT TTCGGCAAAA 
    TATCTAACAA ATATCCCCTT CTGATCTTTT GGTATTTTCT CAAAATAAAC 
    TAATCCAAAC CGAAACTAAA ATTATTTGAT GGAACGTACA TTCGTTAAAT 
    GAATTTCGCA GACATAAATA ACTTTACTTT ATTAAAAGAG AGTAATAAAT 
    TGGAATTCAA TTATATAAAA CTTCTAACTC TTTATTATTA AA

AT1G80110.1

Model type
Protein coding
Short Description
phloem protein 2-B11
Computational Description
phloem protein 2-B11 (PP2-B11); FUNCTIONS IN: carbohydrate binding; LOCATED IN: nucleus; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364); BEST Arabidopsis thaliana protein match is: phloem protein 2-B12 (TAIR:AT5G24560.1); Has 567 Blast hits to 552 proteins in 37 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 567; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G80120.1

Model type
Protein coding
Short Description
Protein of unknown function (DUF567)
Computational Description
Protein of unknown function (DUF567); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF567 (InterPro:IPR007612); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF567) (TAIR:AT3G15810.1); Has 439 Blast hits to 438 proteins in 21 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 9; Plants - 430; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR