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54-1088-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 26430660 [Map]; Strand: c
      • AT5G66110.1 - [+] show detail - Heavy metal transport/detoxification superfamily protein
        Distance: 0; Region: exon2 (CDS)
    Flanking Genome Sequence: 54-1088-1 - 3-prime edge 
    GTGCCACACC CTTACGCACC TGGTGCCTAC GACAAGAAGG CCCCTCCTGG 
    TTACGTTCGT AATGCACTCA CCGACCCTCT AGTGGCCCCG CTTGCTCGTG 
    CCAGCTCCTT CGAGGTCAAA TACACTTCTG CTTTCAGCGA TGACAATCCC 
    AACGCTTGTA CCATCATGTG ATCAATTTAT ATATATAGTC AACTACACAT 
    GTGACTATGT AAGTGTTTTT ATATACCCTT TTTAAGTAAT TCTGAAAAGA 
    CAGTCTGAAT GTTTGTACGA GTCATCATCT AAATTCCACT GAAATTAAAA 
    GGGAGAAACA GAAGAAGAGA GAGGTGAGTA GATGGAGGAG TAACAAGAGA 
    AAGAAGAGAG AAAGGTGAGA AGCCATGAAT AGACTGATTA GGCAAGCCAT 
    GACCCAAACA GGGTATATCA GAAGCAGTGT GTAACAGATG ACGACAAGGC 
    AGTAGCAGAC GAGACTCGCC ACTTTCTCGA TAGCTTCTCC CACCGGCATC 
    TTGATTTGCG TATTTGCTAC TCCTCTGGAT TACATGACTT CATTTAAATA 
    AATAGTAAGA AACACACACA GAGTCTTTGG AGAAATACAT GCACAAGAAG 
    TTGTTTCCTC TCTAAACGGG ACAATGCATC CCGCATTTCA GCCCTTCCTC 
    TGTTTCTTCT TTTTCCCCTC TGTTTTTGCA TCTTCACTGT GTTTACGTAA 
    CAGAAACGTG CTTTGTCATA

AT5G66110.1

Model type
Protein coding
Short Description
Heavy metal transport/detoxification superfamily protein
Computational Description
Heavy metal transport/detoxification superfamily protein ; FUNCTIONS IN: metal ion binding; INVOLVED IN: metal ion transport; LOCATED IN: plasma membrane; EXPRESSED IN: cultured cell, leaf; EXPRESSED DURING: LP.04 four leaves visible; CONTAINS InterPro DOMAIN/s: Heavy metal transport/detoxification protein (InterPro:IPR006121); BEST Arabidopsis thaliana protein match is: farnesylated protein 6 (TAIR:AT4G38580.1); Has 1185 Blast hits to 1108 proteins in 39 species: Archae - 2; Bacteria - 2; Metazoa - 2; Fungi - 3; Plants - 1176; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR