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Mutant Lines
54-1091-1

54-1091-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

3 prime edge [+] show sequence

Chromosome: 4; Position: 56352 [Map]; Strand: w
- AT4G00140.1 - [+] show detail - Calcium-binding EF-hand family protein
  Distance: -2903; Region: intergenic
- AT4G00150.1 - [+] show detail - GRAS family transcription factor
  Distance: 847; Region: intergenic

GTCGTGATCG GTCAATCTAC ACGTGTACGG CAGAAACACA TGTGTCGTTT 
CCCTGTGAGA GATGATCAAC CAAATCAACG GTCAGTTTTT GTCAACTAAT 
GTGTGTATTG ATTTGTAACA TGCCTACGTG AACATAAGCT AGTCACGCAA 
CAAGCAAGGC CTGGGTCACG CGCGCTCGGC TCCACTAAGA CGCGCCGACG 
TAGTCACTCA TCATATATCA CATGTCTAGA TTCAAATGGT AACCGTTTGA 
TGAGCGCAGT AAGTAGAAAC ATTGACCGGT CCAGGCGAGG TCTAGCAAAT 
ACTATTAGAA TTAAAATTGA TGTAATCAAT CACTGATAAA TACTATTAGA 
ACTACTCTAC TTTACACTCA CGTATTCCAT CATTTAATAT ACATACGTGA 
GTGTAAAGTA TTTCTTCACA ATTTATTTTT GAAAATAGCT TTTAACCCAT 
AGCAAATGCC TATGTTGCCA TGGGGTAGAC GGGACTGATC ACACATCGAA 
GCATACTCTT GATAATATAT GGACAGGGAA ATACATATTA GAAAGCTATC 
AAACTTTCTC TTCCTTTTTT TTTGGTTGGC TGGGTTTAAT NTTTCCTATA 
TGGGATGTGN GACATGTCNT TAAAAAATGA ATAACAACAG GCTATNCATG 
GCTTTTTTCT ATTCATGGCT TACAAAAAGT AANNGGTTGA TAAAATNCCC 
GCTTTTNGGG GTTATTTGNC CTN

5 prime edge [+] show sequence

Chromosome: 4; Position: 56468 [Map]; Strand: w
- AT4G00140.1 - [+] show detail - Calcium-binding EF-hand family protein
  Distance: -3019; Region: intergenic
- AT4G00150.1 - [+] show detail - GRAS family transcription factor
  Distance: 731; Region: intergenic

ATCACGACCG GTCTTCTGCT TGAGGACACG GCTTATGATC TGTCAAAACT 
AAACTATTCA CATTCAATCA AATGTGTCTG TATCCAACCA ACAGTTTATT 
GCACAAGAGA CAATAACNTT GCGGCATATT GTCATTTTTC ACTCACAAAT 
TTTAGTCGTC TTTCTCCATT TAATCAACTC TTGATATGTT TCTAAAACGG 
AAATCTTTTG TAATGCTTAA TTAGGACCTT AGATGTTTGA ATATATATTT 
TAAATAATTA TCCTAAATGA TGTTTTAATA TAAAGAGTAA ACCAAAATAT 
GTTGGTTTGT ATTACTTAGA TTAGCTTGTN ATCTTTTTAT TGAAATGAAA 
TCTTCACATT AAAACCCNAA AAAAAACATG TTGATGTATN GCATACACTN 
GGNNTGGNNT CTGAAATATN TCTNTNGGGA AATGCNNNTA ATGCNTNNAG 
CAAANGGGCG CATTTTNTGN GNAANGCGNA NGGGCCCNTT NNAGGNNAAA 
ANGCNNACGG NNNNTTTTTN GGGANAAAAA NAAAAGGTTT GNNNCGGNGN 
AAAAAAAANN GGNNGGGGNA NNANCCNANC AAAANANGGN GGGNNCCNG

AT4G00140.1

Model type: Protein coding
Short Description: Calcium-binding EF-hand family protein
Computational Description: embryo sac development arrest 34 (EDA34); INVOLVED IN: polar nucleus fusion; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein match is: calmodulin-related (TAIR:AT1G73440.1); Has 80 Blast hits to 56 proteins in 14 species: Archae - 3; Bacteria - 0; Metazoa - 4; Fungi - 0; Plants - 72; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT4G00150.1

Model type: Protein coding
Short Description: GRAS family transcription factor
Computational Description: HAIRY MERISTEM 3 (HAM3); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor GRAS (InterPro:IPR005202); BEST Arabidopsis thaliana protein match is: GRAS family transcription factor (TAIR:AT2G45160.1); Has 2283 Blast hits to 2233 proteins in 293 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 2281; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link: InterPro Scan - TAIR