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54-1096-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 26461718 [Map]; Strand: w
      • AT5G66230.2 - [+] show detail - Chalcone-flavanone isomerase family protein
        Distance: 0; Region: exon3 (CDS)
      • AT5G66220.1 - [+] show detail - Chalcone-flavanone isomerase family protein
        Distance: 0; Region: exon3 (CDS)
      • AT5G66230.1 - [+] show detail - Chalcone-flavanone isomerase family protein
        Distance: -867; Region: promoter
    Flanking Genome Sequence: 54-1096-1 - 5-prime edge 
    GGGAAAAGGT GAGTTTGAGA AATTGGCNAN GGTGACGATG AAAAANAGGT 
    TAACGGGGAT ACGATACTCA NANAAAGTAG TANAATACTG TGAGGAGATC 
    ATGAAAGCGT CAGGGAAATA CACAAGATCC GAAGCCAAAG CCATTGACCA 
    ATTCTTGATG GTCTTCAAAA ACCAAGATTT CCCTCCCGGC TCTTCAATCA 
    TCTTCGCTAT CTGTCCTAAA GGCTCTCTCA CAGTGAGTCA ACTTTATTTT 
    TCGGATTATC ATTTCGAATA ATATTGGTCG AATGAATGAT CGAGATCTTT 
    TGACAACTTG TGATGCAGAT

AT5G66220.1

Model type
Protein coding
Short Description
Chalcone-flavanone isomerase family protein
Computational Description
Chalcone-flavanone isomerase family protein; CONTAINS InterPro DOMAIN/s: Chalcone isomerase, subgroup (InterPro:IPR003466), Chalcone isomerase, 3-layer sandwich (InterPro:IPR016088), Chalcone isomerase (InterPro:IPR016087); BEST Arabidopsis thaliana protein match is: Chalcone-flavanone isomerase family protein (TAIR:AT5G66230.2); Has 378 Blast hits to 377 proteins in 81 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 378; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT5G66230.1

Model type
Protein coding
Short Description
Chalcone-flavanone isomerase family protein
Computational Description
Chalcone-flavanone isomerase family protein; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 8 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G51230.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT5G66230.2

Model type
Protein coding
Short Description
Chalcone-flavanone isomerase family protein
Computational Description
Chalcone-flavanone isomerase family protein; FUNCTIONS IN: chalcone isomerase activity, intramolecular lyase activity; INVOLVED IN: cellular amino acid derivative biosynthetic process, flavonoid biosynthetic process; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Chalcone isomerase, subgroup (InterPro:IPR003466), Chalcone isomerase, 3-layer sandwich (InterPro:IPR016088), Chalcone isomerase (InterPro:IPR016087); BEST Arabidopsis thaliana protein match is: Chalcone-flavanone isomerase family protein (TAIR:AT5G66220.1).
Link
InterPro Scan - TAIR