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54-1102-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 26463318 [Map]; Strand: c
      • AT5G66230.2 - [+] show detail - Chalcone-flavanone isomerase family protein
        Distance: 0; Region: intron6 (CDS)
      • AT5G66230.1 - [+] show detail - Chalcone-flavanone isomerase family protein
        Distance: 0; Region: intron2 (CDS)
    Flanking Genome Sequence: 54-1102-1 - 5-prime edge 
    CTTTCCACCA CCTGCAAGAA TAAAAACCAA GTTAACATCT TCTTATCATT 
    CCCCAAGAAT CTTCCATCTA TCAGCAAAAA ACATATACAA ATCTAGTTTT 
    ACCTGAGACG GTGCTCTGAA TTGTCCTGCA ACTACCGGAG AAGTGATCAC 
    AACCTGCACT TCGTCTGAGA AACCAAGAAC TTGGGGGGTG TTGGCCGGAG 
    TTGGGGCGAG AAGACCCATG GGAGAAGTAA CGAGATGGAT GAAAGGACGA 
    GATTCCAACG AAATCTTGGT GAGATC

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 26463434 [Map]; Strand: c
      • AT5G66230.2 - [+] show detail - Chalcone-flavanone isomerase family protein
        Distance: 0; Region: exon7 (CDS)
      • AT5G66230.1 - [+] show detail - Chalcone-flavanone isomerase family protein
        Distance: 0; Region: exon3 (CDS)
    Flanking Genome Sequence: 54-1102-1 - 3-prime edge 
    GTGGAANGCN NCATGTTTGA TGAGAAAGAA GAAAGCTTGG AGTTAGAGAA 
    GAGCCCGAGC ATTACTCGGT CATTGCTTCT GGACTTTAGT GATAAATCAG 
    AATTATGGGA GAGCTCAGAC TGCTCATCTG TGNTNCTCCA CTA

AT5G66230.1

Model type
Protein coding
Short Description
Chalcone-flavanone isomerase family protein
Computational Description
Chalcone-flavanone isomerase family protein; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 8 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G51230.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT5G66230.2

Model type
Protein coding
Short Description
Chalcone-flavanone isomerase family protein
Computational Description
Chalcone-flavanone isomerase family protein; FUNCTIONS IN: chalcone isomerase activity, intramolecular lyase activity; INVOLVED IN: cellular amino acid derivative biosynthetic process, flavonoid biosynthetic process; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Chalcone isomerase, subgroup (InterPro:IPR003466), Chalcone isomerase, 3-layer sandwich (InterPro:IPR016088), Chalcone isomerase (InterPro:IPR016087); BEST Arabidopsis thaliana protein match is: Chalcone-flavanone isomerase family protein (TAIR:AT5G66220.1).
Link
InterPro Scan - TAIR