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54-1109-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 26380346 [Map]; Strand: w
      • AT5G65950.1 - [+] show detail - FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unk...
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 54-1109-1 - 5-prime edge 
    ACACTCCCCG GCGAGATGGA GGAATACCCG GAAGAGCTCA GGACGCCACC 
    GGTAAGTCTG GTGGCTCTCT TCGGATACGC GGAGCTACAC GCGTCCATTA 
    CTAAGTATCT CCACTCCCAG CAGCCTCCCA TCAACGCTCT GGCCTTCCCC 
    NACTTCTCTC AAATCTCTCT CCTCCTTGCT CATGATGATC AGATCAGCCG 
    AACCTCCTCC TTCAGAGATC CTCTCAGCGT CTATGATTCT CCACT

AT5G65950.1

Model type
Protein coding
Computational Description
FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1683, C-terminal (InterPro:IPR012880), Foie gras liver health family 1 (InterPro:IPR021773); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR