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Mutant Lines
54-1110-1

54-1110-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

3 prime edge [+] show sequence

Chromosome: 2; Position: 75144 [Map]; Strand: w
- AT2G01060.1 - [+] show detail - myb-like HTH transcriptional regulator family protein
  Distance: 0; Region: intron1 (5UTR)
- AT2G01060.2 - [+] show detail - myb-like HTH transcriptional regulator family protein
  Distance: 0; Region: intron1 (5UTR)
- AT2G01070.1 - [+] show detail - Lung seven transmembrane receptor family protein
  Distance: -376; Region: promoter
- AT2G01070.2 - [+] show detail - Lung seven transmembrane receptor family protein
  Distance: -376; Region: promoter

CCCACAGGTT CGTAGATTCC ATAACCTTGG ATTGTGTTTT CTTTTTGCTT 
TCTCGGCGAC AAATTCCTCC GATTTTAGTG AACATGTCTC TGATTTTGGT 
GTCCTGTGGT GGATCTGCCG GAGCAAGTCT TAAACTTGAC TTGGACTGTN 
TTTACTAGCT AATTCTGGGC GCTATTTCGT CTTCCTTGTT TCCATTTCTA 
TCTCTTTCTC TCTGGCCAGT CCTCATATGT TATCATTTCC TAGCTTTGCC 
ACTACTCATT ACTTTCCCTT TATCGTGTTT ATATCTTAGC CCTGATGGAA 
GCAGACAACG GAGGCCCCAA TTCTAGTCAT GCATCCAAAC AACGTCTGCG 
TTGGACGCAT GAGCTACATG AACGCTTCGT TGATGCCCGN TGCTCAACTT 
GGGTGGCCCT GATANGTAAA GTTTCCCTTT TTTCTTGNTA TANTCTATGG 
GAAAAATTTA AGTAACNTCA NGTTNTTCCC TCATCAAANA TNNGGGGGGG 
GAANAANTAT GNCACCCCCA ATTTTAATCA AAGTGGGGNC GNNNNGNAGC 
TNTAANTANC ATCCAAGGAG AAGGGAAAAA CCTAANGNNG TNGNTNNCCT 
NNNAAGGGAA ACCCNCNNNA AAAAANTNNT NNNTTNNCCC CGTGNNATNN 
ATNNNTANAG NNGNGGGNTN NACCCNCNGN NNNANNGANA NNNNAAAAAN 
AAAAANANGN NGAAANNNNN NAANTNNNCN ANNNAANANA

5 prime edge [+] show sequence
1. Chromosome: 2; Position: 75260 [Map]; Strand: w
  - AT2G01060.1 - [+] show detail - myb-like HTH transcriptional regulator family protein
    Distance: 0; Region: exon1 (5UTR)
  - AT2G01060.2 - [+] show detail - myb-like HTH transcriptional regulator family protein
    Distance: 0; Region: exon1 (5UTR)
  - AT2G01070.1 - [+] show detail - Lung seven transmembrane receptor family protein
    Distance: -260; Region: promoter
  - AT2G01070.2 - [+] show detail - Lung seven transmembrane receptor family protein
    Distance: -260; Region: promoter
Flanking Genome Sequence: 54-1110-1 - 5-prime edge
```
CNTGTGGGTG GTGGATCTAT ACACNACGCC CCTCCNTTTT CGGAACTTGC 
TCTTCTCCAA NCTAAATCTT ATCTGAAATA GAANATATTG TGTTACAGAC 
TAGTTTACTG AGTCCGGTGG GTTACAGGGC GGGCGGCGAT GGAGCAGATT 
TTTTTTNNAA AAAATTCCAG TCTNCTTCTT ATCGCTCGAT CGACGAATTC 
CAGGCAGTGG CATTGACTAT TGCTGCATTT CTTTCTGGGT AAGCCGGGCC 
TCTCGGTATA GGCCCAAACC ATTCTAAGGC CCAAACCATT ATATTAAGTT 
GGTTGGTCCA CCAAAGTCAG
```

AT2G01060.1

Model type: Protein coding
Short Description: myb-like HTH transcriptional regulator family protein
Computational Description: myb-like HTH transcriptional regulator family protein; CONTAINS InterPro DOMAIN/s: Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: Homeodomain-like superfamily protein (TAIR:AT3G04450.1); Has 1678 Blast hits to 1660 proteins in 60 species: Archae - 0; Bacteria - 1; Metazoa - 0; Fungi - 0; Plants - 1660; Viruses - 0; Other Eukaryotes - 17 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT2G01060.2

Model type: Protein coding
Short Description: myb-like HTH transcriptional regulator family protein
Computational Description: myb-like HTH transcriptional regulator family protein; BEST Arabidopsis thaliana protein match is: myb-like HTH transcriptional regulator family protein (TAIR:AT3G13040.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT2G01070.1

Model type: Protein coding
Short Description: Lung seven transmembrane receptor family protein
Computational Description: Lung seven transmembrane receptor family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, integral to membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Transmembrane receptor, eukaryota (InterPro:IPR009637); BEST Arabidopsis thaliana protein match is: Lung seven transmembrane receptor family protein (TAIR:AT1G72480.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT2G01070.2

Model type: Protein coding
Short Description: Lung seven transmembrane receptor family protein
Computational Description: Lung seven transmembrane receptor family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, integral to membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Transmembrane receptor, eukaryota (InterPro:IPR009637); BEST Arabidopsis thaliana protein match is: Lung seven transmembrane receptor family protein (TAIR:AT1G72480.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link: InterPro Scan - TAIR