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54-1127-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 26836313 [Map]; Strand: c
      • AT5G67260.1 - [+] show detail - CYCLIN D3;2
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 54-1127-1 - 5-prime edge 
    CTCGCAATAG AGCCCATCAA GGACACAAAA CGCACCGTTT TGTGACGCTT 
    CTTCCTCTTT CTCCAAAGCC ATCTTCTTCT TCTTCACGGA AGAAGAAATT 
    GCAAACTACA ATGCTCATTA TGCCATTGGA GCTAGTTGTT TGGTCGA

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 26836429 [Map]; Strand: c
      • AT5G67260.1 - [+] show detail - CYCLIN D3;2
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 54-1127-1 - 3-prime edge 
    ATTGCGAGGA AGAAACCGGG TTTGTGGAGG ACGATCTTGA TGACGATGGA 
    GATTTAGATT TTCTCGAGAA ATCTGATGAG AGTGTTGTAA AGTTTCAGTT 
    TTTACCTCTT TTGGATATGT TCTTATGGGA TGACGATGAG ATTCTGAGTT 
    TGATTTCAAA GGAAAACGAA ACGAATCCAT GTTTTGGGGA ACAAATCTTA 
    GATGGCTTTT TGGTTTCTTG TAGGAAAGAG GCTTTAGATT GGGTTCTTAG 
    GGTTAAATCT CATTATGGGT TTACTTCATT GACGGCTATA CTTGCTGTGA 
    ACTACTTCGA TAGGTTTATG ACAAGTATAA AGCT

AT5G67260.1

Model type
Protein coding
Short Description
CYCLIN D3;2
Curator Summary
Encode CYCD3;2, a CYCD3 D-type cyclin. Important for determining cell number in developing lateral organs. Mediating cytokinin effects in apical growth and development.
Computational Description
CYCLIN D3;2 (CYCD3;2); FUNCTIONS IN: cyclin-dependent protein kinase activity; INVOLVED IN: regulation of cell cycle, regulation of cell proliferation; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cyclin, C-terminal (InterPro:IPR004367), Cyclin D (InterPro:IPR015451), Cyclin-like (InterPro:IPR011028), Cyclin-related (InterPro:IPR013763), Cyclin, N-terminal (InterPro:IPR006671), Cyclin (InterPro:IPR006670); BEST Arabidopsis thaliana protein match is: CYCLIN D3;3 (TAIR:AT3G50070.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR