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54-1138-2

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 26448467 [Map]; Strand: w
      • AT5G66170.3 - [+] show detail - sulfurtransferase 18
        Distance: 0; Region: intron4 (CDS)
      • AT5G66170.1 - [+] show detail - sulfurtransferase 18
        Distance: 0; Region: intron4 (CDS)
      • AT5G66170.2 - [+] show detail - sulfurtransferase 18
        Distance: 0; Region: intron4 (CDS)
      • AT5G66180.1 - [+] show detail - S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
        Distance: -471; Region: promoter
      • AT5G66180.2 - [+] show detail - S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
        Distance: -472; Region: promoter
      • AT5G66180.3 - [+] show detail - S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
        Distance: -488; Region: promoter
    Flanking Genome Sequence: 54-1138-2 - 5-prime edge 
    AGTGTATAAT AGTCCCCTAG TTTACATACA TAATTTACAC CTACTTGTGT 
    GTTTAATCTC AAAGAATCAA TTCATATATA CATAAAAAAA TAGGGTTACA 
    AGAAAGTGAG AAACGTGGGA GGTGGCTACT TGGCTTGGGT GGATCTTTTT 
    TTTCCCATCA ACAAGGAGGA GGAGGAGCCA TCTGCTAATT AATAATCTTA 
    ANATTCTCTT CTTTTCTTAA TCAAATAATA TAACTGCCTG TGTGATGTAG 
    TAATCATTTT CAATTTAAAA TTCCANTTTC TTGTAATCAA AACTTTCGTG 
    TACCAAATTC AATAAAAGCT G

AT5G66170.1

Model type
Protein coding
Short Description
sulfurtransferase 18
Curator Summary
Encodes a thiosulfate sulfurtransferase/rhodanese.
Computational Description
sulfurtransferase 18 (STR18); CONTAINS InterPro DOMAIN/s: Rhodanese-like (InterPro:IPR001763); BEST Arabidopsis thaliana protein match is: Rhodanese/Cell cycle control phosphatase superfamily protein (TAIR:AT2G17850.1); Has 200 Blast hits to 200 proteins in 47 species: Archae - 2; Bacteria - 43; Metazoa - 0; Fungi - 0; Plants - 144; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT5G66170.2

Model type
Protein coding
Short Description
sulfurtransferase 18
Curator Summary
Encodes a thiosulfate sulfurtransferase/rhodanese.
Computational Description
sulfurtransferase 18 (STR18); CONTAINS InterPro DOMAIN/s: Rhodanese-like (InterPro:IPR001763); BEST Arabidopsis thaliana protein match is: Rhodanese/Cell cycle control phosphatase superfamily protein (TAIR:AT2G17850.1); Has 1280 Blast hits to 1276 proteins in 450 species: Archae - 27; Bacteria - 889; Metazoa - 24; Fungi - 9; Plants - 170; Viruses - 0; Other Eukaryotes - 161 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT5G66170.3

Model type
Protein coding
Short Description
sulfurtransferase 18
Curator Summary
Encodes a thiosulfate sulfurtransferase/rhodanese.
Computational Description
sulfurtransferase 18 (STR18); FUNCTIONS IN: thiosulfate sulfurtransferase activity; INVOLVED IN: aging; LOCATED IN: cytoplasm; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Rhodanese-like (InterPro:IPR001763); BEST Arabidopsis thaliana protein match is: Rhodanese/Cell cycle control phosphatase superfamily protein (TAIR:AT2G17850.1).
Link
InterPro Scan - TAIR

AT5G66180.1

Model type
Protein coding
Short Description
S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
Computational Description
S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; CONTAINS InterPro DOMAIN/s: Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p (InterPro:IPR001678); Has 8827 Blast hits to 7075 proteins in 2181 species: Archae - 455; Bacteria - 6424; Metazoa - 542; Fungi - 251; Plants - 202; Viruses - 0; Other Eukaryotes - 953 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT5G66180.2

Model type
Protein coding
Short Description
S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
Computational Description
S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p (InterPro:IPR001678); Has 2637 Blast hits to 2540 proteins in 1031 species: Archae - 209; Bacteria - 1812; Metazoa - 180; Fungi - 59; Plants - 92; Viruses - 0; Other Eukaryotes - 285 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT5G66180.3

Model type
Protein coding
Short Description
S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
Computational Description
S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p (InterPro:IPR001678); Has 8458 Blast hits to 6982 proteins in 2152 species: Archae - 444; Bacteria - 6084; Metazoa - 538; Fungi - 249; Plants - 190; Viruses - 0; Other Eukaryotes - 953 (source: NCBI BLink).
Link
InterPro Scan - TAIR