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54-1147-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 25243514 [Map]; Strand: c
      • AT1G67370.1 - [+] show detail - DNA-binding HORMA family protein
        Distance: 0; Region: intron2 (CDS)
    Flanking Genome Sequence: 54-1147-1 - 5-prime edge 
    TTTGNGGTGA TGGCTNACNA NCTGNTGGAG CCGTANATCA CTGAGNAGGT 
    ACTCGCTTCT TCTGGTAAGC TACGCCGATN ATCNAGCTTN TGAGTTTTTG 
    TNTCTTAACG ATTCNTGAAA TTTCTAGGTC CTTCCTGGNG ATTTTCGTAA 
    ATATTGATCT GGATTTCANA NCACCAGCCC GGNCCGTCGA CCANGGAAGG 
    NAGCCTACTA GGTTTTAGAA AGGAAAGCCG GGAAAAAGAA TCATAAANAA 
    CTTTTTTTTT TTTGGNANGG GNANTCCNAT NATNGATTTG GGGGGGNAAA 
    AAGAATNACA AGCCGGGNCN GNTAACNNNC NCATCNNTCA NNNAGTAATG 
    ATTNGGNNGA ANNANAANAA NTTGNGGTTG GGGNGGGTGN GNAANNGNTT 
    NNANNNNCGG TGGTGNAGAA GAGGNNANGA AGGATNAGCC NNNGGNGTGN 
    AAANGNNGNN NCGACNCNGN NCCNNANNNN CGAANNNNAT AAAGGGNAGN 
    CCNGANGTAN NNCNAATANA TATNNNAGNG NNNNNGNCGA GCNTCNTACA 
    CCTAANNCNN NGCAANATCT NNNNNNNATA ACCNANGTAA NNNCTNCGCN 
    TACAGTTGTC ANTAANGNNT ATCAACATGC CGGNANNGNA AGAACCTNTA 
    NCATGNGANN ACCNCNANCA GANNANANNA AAANNTNAGN NNAGANGNAT 
    CNGTANNGTT GNGNGTNTTG NTNGNNNNNT NTTGNNGNNT GNATTAGNNN 
    NCGTTANNCA TCNANNNNAT TTNNGTANGA NTTNNCCNTN NCGGGNCTNN 
    NNTATATNNC NCNNNGANNN NNCNNNCATN CGACANGCNN NNATGCACNN 
    NCCGNNNNNC AGGGCANNTG NNNANANTNA NNGTAGAG

AT1G67370.1

Model type
Protein coding
Short Description
DNA-binding HORMA family protein
Curator Summary
meiotic asynaptic mutant 1 (ASY1). ASY1 protein is initially distributed as numerous foci throughout the chromatin. During early G2, the foci are juxtaposed to the nascent chromosome axes to form a continuous axis associated signal.
Computational Description
ASYNAPTIC 1 (ASY1); CONTAINS InterPro DOMAIN/s: SWIRM (InterPro:IPR007526), DNA-binding HORMA (InterPro:IPR003511); BEST Arabidopsis thaliana protein match is: DNA-binding HORMA family protein (TAIR:AT4G32200.1); Has 527 Blast hits to 490 proteins in 159 species: Archae - 0; Bacteria - 18; Metazoa - 158; Fungi - 114; Plants - 58; Viruses - 21; Other Eukaryotes - 158 (source: NCBI BLink).
Link
InterPro Scan - TAIR