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54-1169-3

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 26534723 [Map]; Strand: c
      • AT5G66450.2 - [+] show detail - Phosphatidic acid phosphatase (PAP2) family protein
        Distance: 0; Region: intron1 (5UTR)
      • AT5G66450.1 - [+] show detail - Phosphatidic acid phosphatase (PAP2) family protein
        Distance: 0; Region: exon1 (5UTR)
    Flanking Genome Sequence: 54-1169-3 - 3-prime edge
    GTCACACACA CGGATCAAGT AATCTGCTTC TTCTTCGTTT TTACGATTTG 
    ATCCCAAAGT TTTTCAATTC TATAAATTTG TGAAAGCGAA TCGTTTGATT
    TGACTTATAG GTTGACTCTT TTCTTTGGAA ATGGCAGCGT CATCATCTTC
    TCTTCTTCTT CTCCACAAGC CCACCTACAA TTTCCATTTC GCCGCTTCCT
    CTGTTCCCAC TTACATCAAT TCCGCTCGAT TTCGAATTTC GAGCTCAATC
    TTCCCTTTGG ATCGAAGAAG AAGAAGAAGA ATCTGGTCTG TCTCTGGCTT
    TAAATCTATG GCCGATTTAG TAAAAACCAA TGCTCGCAGA GACGGTGAAG
    AACGATTTCA AGCGCTTGAG CAAGAGGCTT TCATCAATAA TTCGTCTCCG
    GAGCTCCAGA ACGAGTTGGG ATCCGACGCC NGAGGTGGGA TTGAAGCAAT
    CGCTAATCGN CTGGTTGGTN TTCGAATTCC CTGATGCACA CAACCTGGTT
    TGATGTATGC ATATTTCTAT GAAAACACTA AGCAAAGCTT TTTCCTTTCT
    TTTACTGCAT TTTTGGCAAA NGGANAACAA ATGGATTGTN CANCTCTGTT
    GGAANCGTCT GCTTTNCCAA NTGATGGNGC ACTTTGGGGC NGGGATGGGA
    NCGGTTNAAA TCCGGGCNNT ANNANNTTTN AAANCGNNNN NNCNTNAAAC
    CAAAAAAAAA ANCNNNNNGG N

AT5G66450.1

Model type
Protein coding
Short Description
Phosphatidic acid phosphatase (PAP2) family protein
Computational Description
Phosphatidic acid phosphatase (PAP2) family protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: biological_process unknown; LOCATED IN: membrane; CONTAINS InterPro DOMAIN/s: Phosphatidic acid phosphatase type 2/haloperoxidase (InterPro:IPR000326); BEST Arabidopsis thaliana protein match is: Phosphatidic acid phosphatase (PAP2) family protein (TAIR:AT3G50920.1); Has 319 Blast hits to 319 proteins in 143 species: Archae - 0; Bacteria - 10; Metazoa - 89; Fungi - 89; Plants - 87; Viruses - 0; Other Eukaryotes - 44 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT5G66450.2

Model type
Protein coding
Short Description
Phosphatidic acid phosphatase (PAP2) family protein
Computational Description
Phosphatidic acid phosphatase (PAP2) family protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: biological_process unknown; LOCATED IN: membrane; CONTAINS InterPro DOMAIN/s: Phosphatidic acid phosphatase type 2/haloperoxidase (InterPro:IPR000326); BEST Arabidopsis thaliana protein match is: Phosphatidic acid phosphatase (PAP2) family protein (TAIR:AT3G50920.1); Has 319 Blast hits to 319 proteins in 143 species: Archae - 0; Bacteria - 10; Metazoa - 89; Fungi - 89; Plants - 87; Viruses - 0; Other Eukaryotes - 44 (source: NCBI BLink).
Link
InterPro Scan - TAIR