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Mutant Lines
54-1174-3

54-1174-3

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

5 prime edge [+] show sequence
1. Chromosome: 2; Position: 18778274 [Map]; Strand: c
  - AT2G45560.1 - [+] show detail - cytochrome P450, family 76, subfamily C, polypeptide 1
    Distance: 0; Region: exon1 (CDS)
  - AT2G45560.2 - [+] show detail - cytochrome P450, family 76, subfamily C, polypeptide 1
    Distance: 0; Region: exon1 (CDS)
Flanking Genome Sequence: 54-1174-3 - 5-prime edge
```
ATCTCAGGNC AAGCTCTGTT ACTCCTCTTT TGCTTTATCT TATCATGTTT 
TCTTATCTTC ACCACCACAA GATC
```

3 prime edge [+] show sequence

Chromosome: 4; Position: 224124 [Map]; Strand: c
- AT4G00490.1 - [+] show detail - beta-amylase 2
  Distance: 0; Region: intron6 (CDS)

GCTGCAAAGG TAAACAANAG NTCTATTGAT GGGGCTAGAG CACTATATTA 
TACTATATNA TACTGGCTNG TGTNGATAGA ACCATTCGGT TGNCTATCCA 
TTTTTGGAAA TNAGNTNTGA GGNATACACN NGTGGAATAN AACNGNTTTC 
TAACTGNNNN GNAAGCNCTA NGTANNTNAC TNNTGNGGAN AATATNATAT 
ANAAACNTAT GNANNNTCNA NAGAANACTA ANAGAAGAGN NAGATNNGNG 
ANNCGCGANN NAGCNTTANG NNNAATGCTN CNNANCCTNN TTTTGNGNNN 
NGGNNGGAGG NGTNNNNGNG GCCCGNGANG GNANAAGAAT NNGNCCANAC 
NNCNANGAGN NGGNGTGGNG GANACGNGNN TNTTNGGGGA TGCAAGACNA 
CANNNGCGAN AANNGGNTGN CCCGNNANCA NNNCGCGNNG AGNANTNANN 
NANGTCNCCN GNGNNCNAGN CAAGNATTNA GNANCCTANG NNCCNCATAC 
AAAANNCCGT AANCNNGNTA TNNCNAGANG GNNAGNANGA TNGTNNNNNA 
AAANNTANTA TANANAANGC CTCCNANNAT ANCGNNANCC CANNNAATCN 
AGCNNNNNCA NACNNANNCG NNNGNNNGAA TAAAAANGNN GAAACAGNGA 
NGANNAANTN NNGGGANNNC ACCANNNNNG CNANNACNNT AAAGNNGGGN 
NCNANAAGAN GNCNNNNTGC CGANCCANNA NGGNNNNNAG NNACCNTNNC 
CGACGANCAA CACNGAGCAN ACNANANNGC NACNNNGNAG NGAGATNNGC 
GTAAGNGGTN ANNGCTATAN NNANNNGACN CGCNNAA

AT2G45560.1

Model type: Protein coding
Short Description: cytochrome P450, family 76, subfamily C, polypeptide 1
Curator Summary: cytochrome P450 monooxygenase
Computational Description: "cytochrome P450, family 76, subfamily C, polypeptide 1" (CYP76C1); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 76, subfamily C, polypeptide 4 (TAIR:AT2G45550.1); Has 35149 Blast hits to 34841 proteins in 1748 species: Archae - 60; Bacteria - 4538; Metazoa - 12163; Fungi - 7375; Plants - 9565; Viruses - 6; Other Eukaryotes - 1442 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT2G45560.2

Model type: Protein coding
Short Description: cytochrome P450, family 76, subfamily C, polypeptide 1
Curator Summary: cytochrome P450 monooxygenase
Computational Description: "cytochrome P450, family 76, subfamily C, polypeptide 1" (CYP76C1); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 76, subfamily C, polypeptide 4 (TAIR:AT2G45550.1); Has 9073 Blast hits to 9044 proteins in 509 species: Archae - 15; Bacteria - 32; Metazoa - 3543; Fungi - 403; Plants - 4946; Viruses - 0; Other Eukaryotes - 134 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT4G00490.1

Model type: Protein coding
Short Description: beta-amylase 2
Curator Summary: Encodes a chloroplast beta-amylase. The enzyme activity is very weak compared to BAM1 and BAM3. Mutant of BAM2 has no visible phenotype.
Computational Description: beta-amylase 2 (BAM2); FUNCTIONS IN: beta-amylase activity; INVOLVED IN: carbohydrate metabolic process, polysaccharide catabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 14, conserved site (InterPro:IPR018238), Glycoside hydrolase, family 14 (InterPro:IPR001554), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, family 14B, plant (InterPro:IPR001371), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: beta-amylase 7 (TAIR:AT2G45880.1); Has 836 Blast hits to 835 proteins in 165 species: Archae - 0; Bacteria - 84; Metazoa - 0; Fungi - 0; Plants - 686; Viruses - 0; Other Eukaryotes - 66 (source: NCBI BLink).
Link: InterPro Scan - TAIR