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Mutant Lines
54-1188-1

54-1188-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

5 prime edge [+] show sequence
1. Chromosome: 5; Position: 26534899 [Map]; Strand: w
  - AT5G66450.2 - [+] show detail - Phosphatidic acid phosphatase (PAP2) family protein
    Distance: 0; Region: exon2 (5UTR)
  - AT5G66450.1 - [+] show detail - Phosphatidic acid phosphatase (PAP2) family protein
    Distance: 0; Region: exon1 (CDS)
Flanking Genome Sequence: 54-1188-1 - 5-prime edge
```
TCNCTCNANN ANCCCNCCTA CAATTTCCAT TTCGCCGCTT CCTCTGTTCC 
CACTTACATC AATTCCGCTC GATTTCGAAT TTCGAGCTCA ATCTTCCCTT 
TGGATCGAAG AAGAAGAAGA AGAATCTGGT CTGTCTCTGG CTTTAAATCT 
ATGGCCGATT TNTTTTNNAC CAATGCTCGC AGAGACGGTG AANAACGATT 
TCAAGCGCTT GAGCAAGAGG CTTTCATCAA TAATTCGTCT CCGGA
```

3 prime edge [+] show sequence

Chromosome: 5; Position: 26534782 [Map]; Strand: w
- AT5G66450.2 - [+] show detail - Phosphatidic acid phosphatase (PAP2) family protein
  Distance: 0; Region: intron1 (5UTR)
- AT5G66450.1 - [+] show detail - Phosphatidic acid phosphatase (PAP2) family protein
  Distance: 0; Region: exon1 (5UTR)

GGAGAAGAAG AAGAGAAGAT GATGACGCTG CCATTTCCAA AGAAAAGAGT 
CAACCTATAA GTCAAATCAA ACGATTCGCT TTCACAAATT TATAGAATTG 
AAAAACTTTG GGATCAAATC GTAAAAACGA AGAAGAAGCA GATTACTTGA 
TCCGTGTGTG TGACGAACTA GCAAAATCTG ATGAAGAAGA TTGGGAAGTT 
GTGGTTATTA TTACAAAGTA TGTGTTAATT TCTAGTAATT CAAATATTAA 
ATGCATAATC ACTTAATCTT ATGCATAAAA GCCCATTAAT TGCGATCCAA 
TCTTATGTTG GTCTTTGTTA AATTTGCCCA TACAAAGCTC TTTAACAATT 
TGCTTTAAAA TAGGCCCATT GATGAATCCA TTTTATCTCT CGGTTTCTAG 
TTTTCTTCTA CCTTTCTTGT GGATTATAGG GAAGGAATTT GTGCTTT

AT5G66450.1

Model type: Protein coding
Short Description: Phosphatidic acid phosphatase (PAP2) family protein
Computational Description: Phosphatidic acid phosphatase (PAP2) family protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: biological_process unknown; LOCATED IN: membrane; CONTAINS InterPro DOMAIN/s: Phosphatidic acid phosphatase type 2/haloperoxidase (InterPro:IPR000326); BEST Arabidopsis thaliana protein match is: Phosphatidic acid phosphatase (PAP2) family protein (TAIR:AT3G50920.1); Has 319 Blast hits to 319 proteins in 143 species: Archae - 0; Bacteria - 10; Metazoa - 89; Fungi - 89; Plants - 87; Viruses - 0; Other Eukaryotes - 44 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT5G66450.2

Model type: Protein coding
Short Description: Phosphatidic acid phosphatase (PAP2) family protein
Computational Description: Phosphatidic acid phosphatase (PAP2) family protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: biological_process unknown; LOCATED IN: membrane; CONTAINS InterPro DOMAIN/s: Phosphatidic acid phosphatase type 2/haloperoxidase (InterPro:IPR000326); BEST Arabidopsis thaliana protein match is: Phosphatidic acid phosphatase (PAP2) family protein (TAIR:AT3G50920.1); Has 319 Blast hits to 319 proteins in 143 species: Archae - 0; Bacteria - 10; Metazoa - 89; Fungi - 89; Plants - 87; Viruses - 0; Other Eukaryotes - 44 (source: NCBI BLink).
Link: InterPro Scan - TAIR