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54-1196-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 1190645 [Map]; Strand: c
      • AT2G03890.2 - [+] show detail - phosphoinositide 4-kinase gamma 7
        Distance: 2100; Region: intergenic
      • AT2G03900.1 - [+] show detail - pseudogene, similar to iron-regulated transporter 2, blastp match of 57% iden...
        Distance: 1141; Region: intergenic
    Flanking Genome Sequence: 54-1196-1 - 3-prime edge 
    GCGTGACCCG GCCGCGCGGA TCCATAATAG CCCAATTATA CAAAACCCAA 
    TTGCCACTCG GACCAAGATA CAAAGTTAAG TAAACCCACG AAAGACTCTC 
    TCATCCGTAG ACACATTCAT AGCCTACTCT AATCCTAACT TAGTGATTGT 
    TCGAGTAATT GCTCGATACA CTTAACTGCT AGGTAGTATA TACGGGGTCG 
    ATCCACAAGG ACCAAAGATA CTATAAGGAT TTCCGAGACT CGTTCTTAGC 
    TAAATTGGAG AGGTTGTTTG TTTGGTTTTC GGATTGTAAA TTAAAATGCA 
    AGAAACTAAA CGATTAAACT TATATGATAA AAAACATTGG GCCATAGGGT 
    ATTTCAAAGA TCAATGATTA ATGGAAATAT TGGACAAGGA ATTCACCAAG 
    TGTTGGATTG TTCACCCACC AATAGGGAAC GTGAGCTGGG TTTAGACCGT 
    CGTGAGACAG GTTAGTTTTA CCCTACTGAT GCCCGCGTCG CGATAGTAAT 
    TCAACCTAGT ACGAGAGGAA CCGTTGATTC GCACAATTGG TCATCGCGCT 
    TGGTTGAAAA GCCAGTGGCG CGAAGCTACC GTGCGCTGGA TTATGACTGA 
    ACGCCTCTAA GTCAGAATCC GGGCTAGAAG CGACGCATGC GCCCGCCGNC 
    CGATTGCCGA CCCTCAGTAN GAGCTTANGC TCCCAAAGGC ACGTGTCGTT 
    GGCTNAGTCC GTTCGGCGGA

AT2G03890.2

Model type
Protein coding
Short Description
phosphoinositide 4-kinase gamma 7
Curator Summary
Phosphoinositide kinase which undergo autophosphorylation and phosphorylate serine/threonine residues of protein substrates. Contains phosphoinositide 3/4-kinase and ubiquitin-like domains.
Computational Description
phosphoinositide 4-kinase gamma 7 (PI4K GAMMA 7); FUNCTIONS IN: inositol or phosphatidylinositol kinase activity; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Phosphatidylinositol 3-/4-kinase, catalytic (InterPro:IPR000403); BEST Arabidopsis thaliana protein match is: Phosphatidylinositol 3- and 4-kinase family protein (TAIR:AT1G13640.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G03900.1

Model type
Pseudogene
Computational Description
pseudogene, similar to iron-regulated transporter 2, blastp match of 57% identity and 4.0e-59 P-value to GP|9716482|gb|AAF97510.1|AF246266_2|AF246266 iron-regulated transporter 2 {Lycopersicon esculentum}
Link
InterPro Scan - TAIR