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54-1216-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 51119 [Map]; Strand: w
      • AT2G01034.1 - [+] show detail - transposable element gene
        Distance: -2769; Region: intergenic
      • AT2G01037.1 - [+] show detail - transposable element gene
        Distance: 7586; Region: intergenic
    2. Chromosome: 2; Position: 54100 [Map]; Strand: w
      • AT2G01034.1 - [+] show detail - transposable element gene
        Distance: -5750; Region: intergenic
      • AT2G01037.1 - [+] show detail - transposable element gene
        Distance: 4605; Region: intergenic
    Flanking Genome Sequence: 54-1216-1 - 5-prime edge 
    TAAATAGTGA TTACCTTGCA GCAGAGACAG AAATACTGTG ATAACTCTTT 
    GTCGAATT

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 53978 [Map]; Strand: w
      • AT2G01034.1 - [+] show detail - transposable element gene
        Distance: -5628; Region: intergenic
      • AT2G01037.1 - [+] show detail - transposable element gene
        Distance: 4727; Region: intergenic
    Flanking Genome Sequence: 54-1216-1 - 3-prime edge 
    AGATAAGAAC GACTCTTCAT AGACGAACAA TGCNACTCTA CCTTTGGAAC 
    AGCAATTCTG AGCTCAGCCT CTCGCCATTT CTTCTCNCTC GACGNTAAGT 
    NTTCGTGCTT TACATTTTTT GATTGTTGAA GTCAAGCTCT AAATTGAGTC 
    CCGACTCAAA AAGCTTAGTT CNCCTNGCAT CGAACTACAT TCAAAAGATA 
    AAAATAATTC TTGCAGTTAA TCCGAGCTCA ACGCTCGCAG TCACACATAA 
    ATTGAGCCGA GCTCGACGCT TGCTATTATG TGAAAATGTT TCACAAAAAC 
    CAAGACCTCG TCTTGCTTTN AGTCTTCAAA ACAGGATAAG CCGAGAGTTC 
    CT

AT2G01034.1

Model type
Transposable element gene
Short Description
transposable element gene
Computational Description
gypsy-like retrotransposon family, has a 0. P-value blast match to GB:AAD27547 polyprotein (Gypsy_Ty3-element) (Oryza sativa subsp. indica)
Link
InterPro Scan - TAIR

AT2G01037.1

Model type
Transposable element gene
Short Description
transposable element gene
Computational Description
gypsy-like retrotransposon family, has a 5.0e-229 P-value blast match to GB:AAD27547 polyprotein (Gypsy_Ty3-element) (Oryza sativa subsp. indica)
Link
InterPro Scan - TAIR