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54-1221-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 2342129 [Map]; Strand: c
      • AT3G07340.1 - [+] show detail - basic helix-loop-helix (bHLH) DNA-binding superfamily protein
        Distance: 0; Region: intron3 (CDS)
    Flanking Genome Sequence: 54-1221-1 - 5-prime edge 
    AACAAGGTGA GAGTTTGATT AAACAACTAA TTAACTCGTT TTTAGTTGTA 
    CTAATATAGT TGTGATTAGA GCAATAACAA ATTTACTTTT TAAAGGTTAC 
    TGGAAAAGCA CTGATGTTGG ATGAAATTAT AAACTATGTC CAATCATTGC 
    AACGACAAGT TGAGGTAATT ACTCATTAGA TTATTGGTCT ACTTTAAACT 
    CTTTCCATTA TTTCATAATC ACTTTTTAAA ACAACTACAC GACTTCGAAT 
    AATTTTTGTT TCTTAATTTT AATTTCAAAT ATGGTGCAGT TCTTGTCGAT 
    GAAGTTATCG TCAGTGAACA CCAGGCTGGA CTTTAACATG GACGCTCTCT 
    TGTCTAAGGA TGTAAGTCCC GTCACA

AT3G07340.1

Model type
Protein coding
Short Description
basic helix-loop-helix (bHLH) DNA-binding superfamily protein
Computational Description
basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT5G48560.1); Has 2639 Blast hits to 2308 proteins in 133 species: Archae - 0; Bacteria - 4; Metazoa - 62; Fungi - 52; Plants - 2177; Viruses - 0; Other Eukaryotes - 344 (source: NCBI BLink).
Link
InterPro Scan - TAIR