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Mutant Lines
54-1224-1

54-1224-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

5 prime edge [+] show sequence

Chromosome: 3; Position: 22394674 [Map]; Strand: w
- AT3G60580.1 - [+] show detail - C2H2-like zinc finger protein
  Distance: 0; Region: exon1 (CDS)

TTTAAGTAAC AACAAAACAG AGCAACGAAG CGAAACAGAG TATGATAATG 
TTGTTGTTGT TGCTAAGAGA ATCCATGAAT GTCCGATTTG TCTAAGAGTT 
TTCGCATCGG GACAAGCACT TGGAGGTCAC AAAAGATCTC ACGGGGTAGG 
GAATTTATCT GTGAATCAAC AACGTCGAGT TCATAGAAAC GAGTCTGTGA 
AACAGAGGAT GATAGATCTT AATCTTCCTG CACCAACCGA AGAAGACGAA 
NTCTCTGTGG TGTTTCAATG AATGCTGAAT AAAGGTAACA GACTTTGCGT 
GATTCGGGTC

3 prime edge [+] show sequence
1. Chromosome: 3; Position: 22394553 [Map]; Strand: w
  - AT3G60580.1 - [+] show detail - C2H2-like zinc finger protein
    Distance: 0; Region: exon1 (CDS)
Flanking Genome Sequence: 54-1224-1 - 3-prime edge
```
ACTCTGTGCT TCTTATGACT TGCTCTATGC CCACCTAATG CTTGATAAGA 
TTTGAACACT TTCCCGCAGG TCTCACACTT GTATCTTCCT TTCGTTGTTG 
CTCGATTAAT CTTGTTGTAA CCTTCTGATT CTTCNTCTCA CT
```

AT3G60580.1

Model type: Protein coding
Short Description: C2H2-like zinc finger protein
Computational Description: C2H2-like zinc finger protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding, nucleic acid binding; INVOLVED IN: regulation of transcription; LOCATED IN: intracellular; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: C2H2-like zinc finger protein (TAIR:AT2G45120.1); Has 2639 Blast hits to 2349 proteins in 138 species: Archae - 0; Bacteria - 0; Metazoa - 1624; Fungi - 13; Plants - 935; Viruses - 0; Other Eukaryotes - 67 (source: NCBI BLink).
Link: InterPro Scan - TAIR