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54-1232-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 6127803 [Map]; Strand: w
      • AT5G18470.1 - [+] show detail - Curculin-like (mannose-binding) lectin family protein
        Distance: 0; Region: exon1 (5UTR)
    Flanking Genome Sequence: 54-1232-1 - 5-prime edge 
    GTNNTNTNGT AAGCAGAGAC CAAAGACTAT TCATAATCAC TTATCAGAGT 
    ATAGAATACT CTTTTTTTTG TCAATCGANT ATATAATACT CTGATATCAC 
    TTATACAAAG TTCTACNAAA CTCATTAAAN ATTTGANAGT GTACAAGGGA 
    CAAAAGGTGC TATAAATATC TCTTAAAANA GAGCTAAAAN TTAAGGAAAC 
    ACTTAACCAA GCAAACAACA AATGGCTCTT TCAATCGTTC TTCTTCCCTT 
    CATTCTCATT CTCATACCGA CTTTTCTCAG TTCGGTTTTC GCCGTTTCAC 
    CACTCAAAAC TGATACGTTA AAACCGGGGC AGCAGCTCAA ANACTGGGAG 
    CAGTTGATCT CTGCGGATGG TATCTTCACT CTCTGCTACT

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 6127687 [Map]; Strand: w
      • AT5G18470.1 - [+] show detail - Curculin-like (mannose-binding) lectin family protein
        Distance: -110; Region: promoter
    Flanking Genome Sequence: 54-1232-1 - 3-prime edge 
    AACATAACGA GTCTCATAAG CTTTAAATTA TATGATGGCG ACTACCTAAA 
    AAATTTCTTC CGAAGGGTTT TACTAGAGTC TCTTTACGAG CAGAAGTTTC 
    AAACACAGAC GAAAGATTGG GTTAAGGTTG AGGTCATATC TCTGTCCTTT 
    GAACAGCTAA ACTAAAAGTT GTTAATGTAT TTGGTCTTAC TTCAGTTTAC 
    ATTAGCTTGT ACGGGCTTTG TATTTTGTAA TTTAAAATTG TAAATCAGTT 
    ACTAATTTGA GACATCAACT TTGACTGGTG TGGAAAATGG AAACGCGTCG 
    TGGGCGGCTC TTTCAATGGA ATAATGATGA TTGTTAGTCA CTAATTCCAA 
    GCATTAACGA CTTGAGGAAT AATTTTCCAA GTCTTCTTCC GATAGCAACG 
    TGTATTGGAA TCTTCCACAC NNACTTTTAA TTCTTTTTCN AAACTTTTTA 
    NGTATCGAAA TACAGNNATA TGAATNTCGA TTCTTNCNTG NCNCTCTACA 
    TNATGACTGN NNNNTNTNTN TNNTNTNGNN GAATGANNNA NNNNGAANGG 
    NNNNCCNNCC

AT5G18470.1

Model type
Protein coding
Short Description
Curculin-like (mannose-binding) lectin family protein
Computational Description
Curculin-like (mannose-binding) lectin family protein; FUNCTIONS IN: sugar binding; INVOLVED IN: response to karrikin; LOCATED IN: plant-type cell wall; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Curculin-like (mannose-binding) lectin (InterPro:IPR001480); BEST Arabidopsis thaliana protein match is: lectin protein kinase family protein (TAIR:AT1G67520.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR