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54-1243-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 26555874 [Map]; Strand: w
      • AT5G66530.1 - [+] show detail - Galactose mutarotase-like superfamily protein
        Distance: -183; Region: promoter
      • AT5G66530.2 - [+] show detail - Galactose mutarotase-like superfamily protein
        Distance: -15; Region: promoter
    Flanking Genome Sequence: 54-1243-1 - 5-prime edge
    AGNANTGACG ACGATGGANA AACCGGCTCT TCAAATGGCG GTCGGGACCC 
    AAAGTTTAAC GTTGACCACT AACTTGANAA TAATATCGTT TATGGATTAC
    NAATATCCNT CCTNANTTCC AANNACTTNN CCATAATATC NACCAANAAA
    GGTTTTGGNT NTTCNATACN TTCCCACCAG GTCCAATATT ACTAATGGGC
    TTATTAAAAA TTAGTGCATA ACGCTAGAGA GAGGGGTCGA ACCTCTGACC
    TTGTGGTTAA CAGCCACACG CTCTAACCAA CTGAGCTACT CCAGCTTACT
    TGTTCTATCT ATTACCTTTT TACTATTTCA CTTCTT
  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 26555806 [Map]; Strand: w
      • AT5G66530.1 - [+] show detail - Galactose mutarotase-like superfamily protein
        Distance: -115; Region: promoter
      • AT5G66530.2 - [+] show detail - Galactose mutarotase-like superfamily protein
        Distance: 0; Region: exon1 (5UTR)
    Flanking Genome Sequence: 54-1243-1 - 3-prime edge
    ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCCC 
    ACTCGTCATT CGTTTGTTTG TCTCTTCCGG ATAGATATAT AAATAAAAAT
    GTCCGATATT TTTTTAAAAA ATTACATTAG TTTTGCTGCG TTTAGTATTC
    AATTTCATCG ACCCAAATCA AAATCTCTAT TCAATCCTTT TCCTTCTTCT
    TGTTGCCCTA GTACGAGAGG ACCGGGAAGG ACGCAATATA TAGGATACTA
    GATAGAGAGT GACTGAAGGA GAGAAAAACA AAAATGGCGA TTGTTTCCGT
    CTCTAACTCT TTTCTCACTT TCAATTCTCC CAATCAGCTC CGATTTAGCC
    GGTAATATTC TTACTGCATT TTGTTTTTTT TCTTTTGGTT TCGCTTCTAA
    TGTCTCTACC TTGCATTTGA TCCACACAAA AAAAAACTCG ATCTTGGATA
    TTGCANAANA ANATTCTNTG CCATGGCTTC TTCAACTACT GGAGTGANAG
    TCGCTGAAGG ANAAGGCAAT TTGCCAAAAC TTGTCCTTAC TTCTCCTCAG
    AACAGGTATC AAAAACTATT GACCATCTCA TACTAAGTAA GTCAGGTTCA
    GCTTTATGTC ATCTGGGTTG ATTTATAATT GGATGCAGCG AGGCTGANAT
    ATATCTCTTC GGAGGCTGCA TTACTTCTTG GAAAGTTGCG AGCGGTAAAG
    ATCTTCTTTT TGTCANACCA NATGCTGTCT TCAATAAGAT TAAGCCCATT
    AGGTNTGGGG TGTGTGA

AT5G66530.1

Model type
Protein coding
Short Description
Galactose mutarotase-like superfamily protein
Computational Description
Galactose mutarotase-like superfamily protein; FUNCTIONS IN: carbohydrate binding, isomerase activity, aldose 1-epimerase activity, catalytic activity; INVOLVED IN: galactose metabolic process, carbohydrate metabolic process; LOCATED IN: apoplast, chloroplast, chloroplast stroma; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase-type carbohydrate-binding (InterPro:IPR011013), Aldose 1-epimerase (InterPro:IPR008183), Glycoside hydrolase-type carbohydrate-binding, subgroup (InterPro:IPR014718); BEST Arabidopsis thaliana protein match is: Galactose mutarotase-like superfamily protein (TAIR:AT5G57330.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT5G66530.2

Model type
Protein coding
Short Description
Galactose mutarotase-like superfamily protein
Computational Description
Galactose mutarotase-like superfamily protein; FUNCTIONS IN: carbohydrate binding, isomerase activity, aldose 1-epimerase activity, catalytic activity; INVOLVED IN: galactose metabolic process, carbohydrate metabolic process; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase-type carbohydrate-binding (InterPro:IPR011013), Aldose 1-epimerase (InterPro:IPR008183), Glycoside hydrolase-type carbohydrate-binding, subgroup (InterPro:IPR014718); BEST Arabidopsis thaliana protein match is: Galactose mutarotase-like superfamily protein (TAIR:AT5G57330.1).
Link
InterPro Scan - TAIR