Home
Mutant Lines
54-1304-1

54-1304-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

5 prime edge [+] show sequence
1. Chromosome: 5; Position: 26462569 [Map]; Strand: w
  - AT5G66230.2 - [+] show detail - Chalcone-flavanone isomerase family protein
    Distance: 0; Region: intron4 (CDS)
  - AT5G66230.1 - [+] show detail - Chalcone-flavanone isomerase family protein
    Distance: -16; Region: promoter
Flanking Genome Sequence: 54-1304-1 - 5-prime edge
```
CAGGCCAACG GCTACTTTCT TTCAAAAACC CTTCACAGCG TTTCAATACC 
CCTGTTTATT TATACTTTAC CCAAATTCCC AAACGCCACA ATCACTTGTC 
TGATTCTCTC ATATAATAGA GTTTTCTTTC TCTTCTCCTC TGCTTAATTT 
CCCAGAAATT ACTCTTTCTG TGCTTATCGG ATTCAATAGA TTCTTAGTAA 
ATCGTAATGG AGACACCATC ATCGACAAGA AGAGTCACGA GATC
```

3 prime edge [+] show sequence

Chromosome: 5; Position: 26462505 [Map]; Strand: w
- AT5G66230.2 - [+] show detail - Chalcone-flavanone isomerase family protein
  Distance: 0; Region: intron4 (CDS)
- AT5G66230.1 - [+] show detail - Chalcone-flavanone isomerase family protein
  Distance: -80; Region: promoter

ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCTG 
CGTTGGGTAC AGAAATGGAA GGAGCCGTTT ATCAAACTAG CCGTTGTGTT 
ATTTCCTTCG CTGAATTATG GACTTTTTCG TCCCTAAAAA GGCCATGATT 
AAAAGCCCAC ACTATTACAT TAGATTTTGG AAGGCCCACC TCTTTTATTT 
GATCACTGAT TTTTTCATTA ACACAAAATC ATCTTTCATA ATCTTTAGAA 
TCTTACTAAA AACATAAAAC TGTCTTAATT AAGTCACAAC AATCTTTATT 
TTAGCTGTCA TCATAAGTCA CATAACATCC TCCGCTGGCT TCATTTTCTA 
AAATTATTCA AGATTGGGCG AGTTGGAATA GTTTCAATTT TTTGTAGCTA 
CGTTGACGTT AGCTTCGTTG TACGGGTCTT TTTTGTTCAT CAGCTTAGAT 
AATCTCTCAN CGAGGCTCTT CCTTGTCGCA GGGGATACAC CATTCTTCCC 
TATCATCGAC TCAAGAACTG CCTCACCCAA CAACTTATTC TTGATAACCG 
CTTTTNCAGT TTTNNGGGAC TCTNTNCTNT TTNNAAAATG CNATCNGNNT 
NNCNAGNNGN NAAAANATNA CNNNNNNNGG CCGNNNANCN CNCNNGC

AT5G66230.1

Model type: Protein coding
Short Description: Chalcone-flavanone isomerase family protein
Computational Description: Chalcone-flavanone isomerase family protein; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 8 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G51230.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT5G66230.2

Model type: Protein coding
Short Description: Chalcone-flavanone isomerase family protein
Computational Description: Chalcone-flavanone isomerase family protein; FUNCTIONS IN: chalcone isomerase activity, intramolecular lyase activity; INVOLVED IN: cellular amino acid derivative biosynthetic process, flavonoid biosynthetic process; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Chalcone isomerase, subgroup (InterPro:IPR003466), Chalcone isomerase, 3-layer sandwich (InterPro:IPR016088), Chalcone isomerase (InterPro:IPR016087); BEST Arabidopsis thaliana protein match is: Chalcone-flavanone isomerase family protein (TAIR:AT5G66220.1).
Link: InterPro Scan - TAIR