1. Home
  2. Mutant Lines
  3. 54-1306-1

54-1306-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 26462620 [Map]; Strand: c
      • AT5G66230.2 - [+] show detail - Chalcone-flavanone isomerase family protein
        Distance: 0; Region: intron4 (CDS)
      • AT5G66230.1 - [+] show detail - Chalcone-flavanone isomerase family protein
        Distance: 0; Region: exon1 (5UTR)
    Flanking Genome Sequence: 54-1306-1 - 5-prime edge 
    GNTGAGGCTG ANCNCNNNAA GGNCANTACT CTATNTAAAC ACAGNCGGAT 
    GGANAGNGAC ANAATCATAC CTACTAGCTG GTACGACNCN TTACAGGNCC 
    ANCCNANGNG GGCATGGATA TGAAAAAGCC TGAACTCACC GCGACGGTCT 
    GTCGAGAAGT TTCTGATCGA AAAGTTCGAC AGCGTCTCCG ACCTGAATAT 
    GGAAGGAGCC GTTTATCAAA CTAGCCGTTG TGTTATTTCC TTCGCTGAAT 
    TATGGACTTT TTCGTCCCTA AAAAGGCCAT GATTAAAAGC CCACACTATT 
    ACATTAGATT TTGGAAGGCC CACCTCTTTT ATTTGATCAC TGATTTTTTC 
    ATTAACACAA AATCATCTTT CATAATCTTT AGAATCTTAC TAAAAACATA 
    AAACTGTNTT AATTAAGTCA CAACAAATCT TTATTTTAGC TGGNATNATA 
    AGTNACATAA CATNCNNNGN TGGCTTNATT NNNTAAANNA TNCAANATGG 
    GCNANTNGGA ATAGNNNNAA NTNTTNGGGG NTNNGGNNGA NNNTNNCTTN 
    NNTGNNCGG

AT5G66230.1

Model type
Protein coding
Short Description
Chalcone-flavanone isomerase family protein
Computational Description
Chalcone-flavanone isomerase family protein; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 8 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G51230.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT5G66230.2

Model type
Protein coding
Short Description
Chalcone-flavanone isomerase family protein
Computational Description
Chalcone-flavanone isomerase family protein; FUNCTIONS IN: chalcone isomerase activity, intramolecular lyase activity; INVOLVED IN: cellular amino acid derivative biosynthetic process, flavonoid biosynthetic process; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Chalcone isomerase, subgroup (InterPro:IPR003466), Chalcone isomerase, 3-layer sandwich (InterPro:IPR016088), Chalcone isomerase (InterPro:IPR016087); BEST Arabidopsis thaliana protein match is: Chalcone-flavanone isomerase family protein (TAIR:AT5G66220.1).
Link
InterPro Scan - TAIR