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54-1338-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 3697994 [Map]; Strand: w
      • AT3G11700.1 - [+] show detail - FASCICLIN-like arabinogalactan protein 18 precursor
        Distance: -845; Region: promoter
    Flanking Genome Sequence: 54-1338-1 - 5-prime edge 
    AGTGGAATTG AGGTGGGACA TTNNACGATT CACGAACTTA GCGTANCAAC 
    CAAAAGGTGT CCCAATAAAT AAATAAATGA TGGTTGTATT GGGTCATACA 
    CCGACAGCTT CAATTCAAGC CACGTGTTCT CCCTTCTTCT TCGGCTGC

  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 3697878 [Map]; Strand: w
      • AT3G11700.1 - [+] show detail - FASCICLIN-like arabinogalactan protein 18 precursor
        Distance: -961; Region: promoter
    Flanking Genome Sequence: 54-1338-1 - 3-prime edge 
    ATTCCACTTA CCTGTTACTC TCACGCTCTC CAACTTGGCA CGTGCCCTTA 
    CGTCCAACTA CATCAAAAGA GCCAGAGGAC AGCGTCTTTG GCTAATGGTT 
    GTGGACTTGA GGAAAATTGT AACACAATTA TGCGATTCTG ATTGTTCCCG 
    CCTGATAAGA AGACAGGCTT TAAGGCCCAA CTGAATTTAA ACCCATCTTT 
    TCGAAGTCTT TTATCTTAAG CCCGATTTCT CTTATTGTTT TGCTACGGGC 
    CTAACTCGTT TTTTTCTTCG AAAAGAAACA AAAAATCGCA TACACTTTAT 
    ATACCCAGAA GGTCATCTAG AACGATCTGA AATTAGGAAA CACAAGTCAT 
    GCATAAACCC ATCTCACGAA CAGCATGTAA AATATTGGGC CGAAATGGGC 
    CAACTATCAA ATGAACATGA GAAGGGGAAG CTAAATGAGG TGTCGAGAGA 
    TGCTAGGCAC TGCTATATAA AAATCTATGG GCTATCCAAG ATTCATTTCG 
    GTGACGCCAT TTTTGTTAAA GTTAGAAGTN TTTACTGGTG ACNACCCTTT 
    NGCCTCTCAT TCAGAATTAA ATATTCNNTA TCTTTGAATA ACAAGAAACT 
    GNAAGGNCCA GNTTATNAAC TAAAATTGCC NAANANCNAA NATANTCNTT 
    TTAAACATCC TGGGATTTTT TTTNNAANAA ATANACCNAN NTNNNAANAA 
    AAAAGGNNTN

AT3G11700.1

Model type
Protein coding
Short Description
FASCICLIN-like arabinogalactan protein 18 precursor
Computational Description
FASCICLIN-like arabinogalactan protein 18 precursor (FLA18); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to cyclopentenone, cell adhesion; LOCATED IN: vacuole; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: FAS1 domain (InterPro:IPR000782); BEST Arabidopsis thaliana protein match is: FASCICLIN-like arabinogalactan protein 17 precursor (TAIR:AT5G06390.1); Has 488 Blast hits to 470 proteins in 128 species: Archae - 2; Bacteria - 195; Metazoa - 32; Fungi - 4; Plants - 192; Viruses - 0; Other Eukaryotes - 63 (source: NCBI BLink).
Link
InterPro Scan - TAIR