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54-1341-2

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 15953667 [Map]; Strand: w
      • AT4G33070.1 - [+] show detail - Thiamine pyrophosphate dependent pyruvate decarboxylase family protein
        Distance: 0; Region: exon3 (CDS)
    Flanking Genome Sequence: 54-1341-2 - 5-prime edge 
    CGTGAAAAAC TAACAAAATC GGTTATNCGA TAACGGTCGG TACGGGATTT 
    TCCCATCCTA CTTTCATCCC CTTTAGCCTG AAGCATCAGC TAGCTCAACA 
    AAGGCATCAC AAGCT

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 15953678 [Map]; Strand: w
      • AT4G33070.1 - [+] show detail - Thiamine pyrophosphate dependent pyruvate decarboxylase family protein
        Distance: 0; Region: exon3 (CDS)
    Flanking Genome Sequence: 54-1341-2 - 3-prime edge 
    ATGAAAACGG TAGAGGTATT TTACNGACCG TTACCGACCG TTTTCATCCC 
    TTAATCAGGC TATGCTTTGG NGATGATGCC TTCTGCGAAA GGCTTTGTAC 
    CAGAGCACCA TCCTCATTTC ATTGGAACTT ATTGGGGAGC AGTGAGCACT 
    CCTTTTTGCT CTGAGATTGT GGAATCTGCG GATGCNTTAC ATTTTTGCAG 
    GTCCAATCTT CAACGACTAT AGCTCTGTTG GTTACTCGCT TCTCCTCAAG 
    AAAGAAAAAG CCATCGTTGT GCAACCTGAT CGTATCACTG TGGCCAATGG 
    TCCTACTTTT GGTTGCATTT TGATGAGCGA TTTCTTCAGG GAATTGTCTA 
    AGAGGGTGAA GCGTAACGAG ACTGCATATG AGAACTACCA TAGGATCTTT 
    GTCCCTGAAG GTAAGCCATT GAAGTGTGAA TCAAGAGAGC CATTGAGAGT 
    TAACACAATG TTCCAGCACA TTCAGAAGAT GCTCTCTAGT GAAACCGCTG 
    TGATTGCTGA AACCGGTGAT TCTTGGTTCA ATTGCCAAAA ACTAAAGCTG 
    CCAAAAGGAT GTGGGTAAGT GTCCAGAAAA AAAAAGAGAC TCTAATCTTT 
    ACACTTAATA TAGTGAAGTA GGCACAAGAT TTGAACCTGC TTTCTTCATT 
    GTAGGTACGA GTTTCAGATG CAGTATGGAT CGATTGGGTG GTCTGTTGGT 
    GCAACTCTAG GATACGCACA NGCATCACCA GANANGCGAG TGTTGGCATT 
    CATCGGNGAN GGGGAGTTTC CAANTN

AT4G33070.1

Model type
Protein coding
Short Description
Thiamine pyrophosphate dependent pyruvate decarboxylase family protein
Computational Description
Thiamine pyrophosphate dependent pyruvate decarboxylase family protein; FUNCTIONS IN: in 6 functions; LOCATED IN: membrane; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: TPP-binding enzyme, conserved site (InterPro:IPR000399), Thiamine pyrophosphate enzyme, central domain (InterPro:IPR012000), Pyruvate decarboxylase/indolepyruvate decarboxylase (InterPro:IPR012110), Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain (InterPro:IPR012001), Thiamine pyrophosphate enzyme, C-terminal TPP-binding (InterPro:IPR011766); BEST Arabidopsis thaliana protein match is: Thiamine pyrophosphate dependent pyruvate decarboxylase family protein (TAIR:AT5G01320.1); Has 20589 Blast hits to 20526 proteins in 2548 species: Archae - 428; Bacteria - 13367; Metazoa - 177; Fungi - 761; Plants - 551; Viruses - 4; Other Eukaryotes - 5301 (source: NCBI BLink).
Link
InterPro Scan - TAIR